| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002409 |
|---|
| Symbol | |
|---|
| ID | 8556104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 882547 |
|---|
| End bp | 883350 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646405467 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_003285036 |
|---|
| Protein GI | 262393182 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACA ACGATTTAGT CACCGTGAAC AACCTCACTT TTTCACGGGG AGAGCGCAAG
ATCTTTGATG GTATTGATCT GCATGTTCCT GAGGGCAAAG TGACGGCCAT TATGGGACCA
TCGGGAATTG GTAAAACAAC ACTGCTGCGT TTAATTGGTG GTCAGTTGTA TCCCGAGCAA
GGAGAGATCT GGTTTGATGG CGACAATATT CCCTCTCTCT CGCGTAAAAA ACTCTACCAT
GCTCGAAAGA AAATGAGCAT GTTGTTTCAA TCAGGAGCTT TATTCACTGA TTTGAATGTC
TTTGATAACG TCGCCTTCCC ATTGCGAGAG CATACGAATT TATCTGAAGA GCTGATTCGT
ACCATGGTAT TGCTTAAGCT TGAAGCCGTC GGTCTACGCG GCGCGGCACA ACTGATGCCG
AGCGAGCTAT CGGGTGGCAT GGCAAGACGC GCTGCGTTGG CGCGTGCGAT CGCCCTGGAT
CCTGATTTAA TCATGTATGA TGAACCATTT GTCGGACAAG ACCCAATCAC CATGGGTGTC
TTGGTTGAGC TCATTAGTAA TCTAAATCAA GCGTTAGGTT TAACTTCTAT AGTCGTTTCT
CACGACGTGC CTGAAGTAAT GAGTATTGCC GATTGGGTTT ATCTGATGGC CGATGGCAAA
ATTATCGCTT TTGGCACACC AGAAGAGCTT AATCAGAATC CTGACCCTCG CGTTCAGCAG
TTCTTACAAG GTGATGCAGA TGGTCCTGTA CCGTTTCGCT TCCCTTCTCA AAGTATCGAA
AAGGACTTAT TTGATGGTCG ATAA
|
|---|
| Protein sequence | MSNNDLVTVN NLTFSRGERK IFDGIDLHVP EGKVTAIMGP SGIGKTTLLR LIGGQLYPEQ
GEIWFDGDNI PSLSRKKLYH ARKKMSMLFQ SGALFTDLNV FDNVAFPLRE HTNLSEELIR
TMVLLKLEAV GLRGAAQLMP SELSGGMARR AALARAIALD PDLIMYDEPF VGQDPITMGV
LVELISNLNQ ALGLTSIVVS HDVPEVMSIA DWVYLMADGK IIAFGTPEEL NQNPDPRVQQ
FLQGDADGPV PFRFPSQSIE KDLFDGR
|
|---|
| |