| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002371 |
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| Symbol | |
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| ID | 8556066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 840462 |
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| End bp | 842186 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405429 |
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| Product | MSHA biogenesis protein MshE |
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| Protein accession | YP_003284998 |
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| Protein GI | 262393144 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.46391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC AGTTGAGAAA ACGCTTAGGC GATCTTCTGG TTGAAGAAGG CATCGTCTCT
GAAGAACAAA TCCAGCAAGC ACTAAACGCA CAGCGTAGCA CCGGGCAGAA GCTAGGCGAT
GCGTTAATTG ATCTCGGCTT TATTACTGAG AAGCAAATGT TGGACTTCTT GTCCCAACAA
CTTGGTTTGC CATTGATCGA TCTTGGTCGC GCCCCTGTGG ATGCGGAAGC GGTACAGATT
CTACCTGAGG TACACGCACG TCGCTTACGT GCGATGGTGG TTGCTCGAAA TGGGGACACG
TTGCGCGTTG CCATGAGTGA CCCTGCGGAC TTGTTCATCC AAGAATCACT GATGAATTTG
CTAGGTGAAT ACAACCTTGA GTTCATCGTG GCTTCAGAGC GCCAACTCAT TTCAAGCTTT
GACCGTTATT ATCGCCGCAC CAAAGAAATC GCATCTTTCG CGGAACAGTT GCATGAAGAG
CATAAAGATG AGCAAAGCTT CGATTATGGT ATTGATGGAA CCGACAGCGA GGAAGTTACC
GTTGTAAAGC TGGTTAATTC CATGTTTGAA GATGCGGTAC AAGTCGGGGC ATCGGATATT
CATATTGAGC CAGACGATCA GGTTTTGCGC TTACGCCAGC GTATTGATGG TGTACTTCAT
GAAACCATCC TGAATGAAGT GAATATCGCA TCGGCTTTGG TTCTTCGATT GAAGTTGATG
GCGCACCTGG ACATCTCTGA GAAGCGCTTG CCACAAGATG GCCGATTCAA TATCAAAGTG
CGTGGTCAAT CAATCGATAT TCGTATGTCG ACGCTACCAA CGCAATACGG GGAGTCCGTA
GTAATGCGTC TGCTTAACCA GTCTGCTGGT TTGCGTCCAT TAGAAGAATC AGGATTGCCG
CCAGATTTGC TTGCTCGTTT ACGTCGACAG CTGGCTCGTC CGCACGGCAT GATCTTGGTG
ACGGGGCCGA CAGGTTCAGG TAAAACCACC ACGCTTTACG GCGCATTAAG TGAGCTCAAC
GAGCCAGGGA AAAAGATCAT TACAGCAGAG GACCCGGTCG AATACCGTCT GCCTCGTATC
ACTCAGGTAC AGGTAAACAG TAAGATCGAT CTGACTTTCT CGCGTGTGCT TCGAACCTTT
TTACGTCAAG ACCCAGACAT TATTCTCGTC GGTGAGATGC GTGACCAAGA AACGGTAGAA
ATTGGTCTAC GGGCTGCACT AACGGGTCAC TTAGTATTGA GCACTCTTCA CACCAACGAC
GCGGTTGACA GTGCGTTACG CATGATTGAT ATGGGTGCGC CGGGTTACTT GGTTGCCAGT
GCGGTCAGAG CTGTGGTGGC GCAGCGTCTT GTTCGCCGTG TTTGTCCAGA TTGCAAAACA
GAAGACCATC TAGACGAGTC ACGCCAACAG TGGTTAGCTG GGCGTTTTCC AAACCAAGTG
GGCACCACTT TTTATAAAGG TGCAGGCTGT CAAAACTGTA ACTTGACTGG CTATCGAGGC
CGAATTGGTG TGTTTGAAAT GCTCGAACTG GAGCAAGAAA TGATGGATAA ACTGCGCGCC
AATGATGCGG TTGGCTTTGC CCAAGCCGCG CGTCGCTCAG AAAACTATAA GCCACTGCTT
GCTTCTGCAA TGGAACTGGC GCTACAAGGC ACCGTCAGTT TGGATGAAGT GATGACCCTA
GGTGAGGGTG ATGCTTCTGG TAAGACTGAT CCCATTTTCA TATAG
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| Protein sequence | MKIQLRKRLG DLLVEEGIVS EEQIQQALNA QRSTGQKLGD ALIDLGFITE KQMLDFLSQQ
LGLPLIDLGR APVDAEAVQI LPEVHARRLR AMVVARNGDT LRVAMSDPAD LFIQESLMNL
LGEYNLEFIV ASERQLISSF DRYYRRTKEI ASFAEQLHEE HKDEQSFDYG IDGTDSEEVT
VVKLVNSMFE DAVQVGASDI HIEPDDQVLR LRQRIDGVLH ETILNEVNIA SALVLRLKLM
AHLDISEKRL PQDGRFNIKV RGQSIDIRMS TLPTQYGESV VMRLLNQSAG LRPLEESGLP
PDLLARLRRQ LARPHGMILV TGPTGSGKTT TLYGALSELN EPGKKIITAE DPVEYRLPRI
TQVQVNSKID LTFSRVLRTF LRQDPDIILV GEMRDQETVE IGLRAALTGH LVLSTLHTND
AVDSALRMID MGAPGYLVAS AVRAVVAQRL VRRVCPDCKT EDHLDESRQQ WLAGRFPNQV
GTTFYKGAGC QNCNLTGYRG RIGVFEMLEL EQEMMDKLRA NDAVGFAQAA RRSENYKPLL
ASAMELALQG TVSLDEVMTL GEGDASGKTD PIFI
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