Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002315 |
Symbol | |
ID | 8556000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 769974 |
End bp | 771848 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405363 |
Product | argininosuccinate lyase/N-acetylglutamate synthase |
Protein accession | YP_003284942 |
Protein GI | 262393088 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase [COG1246] N-acetylglutamate synthase and related acetyltransferases |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.784515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTAT GGGGCGGAAG ATTTACCCAA GCGGCAGACA CTAGATTTAA AGAGTTTAAC GATTCGTTGC GTTTTGACTA CCGATTGGCT GAGCAAGACA TCGTAGGTTC AATCGCATGG TCTAAAGCTC TGCTTTCTGT AGATGTTCTA TCGGCAGAAG AACAGCAAAA GCTGGAACTT GCTTTAAACG AGCTGAAGTT AGAAGTGATG GAAGATCCTC ATCAAATTCT TCGTTCAGAT GCAGAAGATA TCCACTCTTG GGTTGAACAG CAGCTGATTA GTAAAGTGGG AGATTTAGGT AAAAAGCTCC ACACTGGGCG TTCTCGTAAT GACCAAGTAG CGACAGACCT AAAACTTTGG TGTCGTCAGC AAGGCCAGCA ACTGTTGATT GCTTTAGATC GTCTGCAAGC ACAAATGGTT CATGTTGCTA AGCAGCACCA AGGCACTGTA TTGCCTGGCT ATACTCATCT TCAGCGCGCT CAACCTGTCA CCTTTGCTCA CTGGTGTTTG GCTTATGTTG AAATGTTCGA GCGTGACTAC TCTCGTCTGA ATGATGCCTT ACAGCGTCTC GACACTTGTC CACTTGGCTC GGGTGCTTTA GCTGGCACGG CTTATCCGAT TGATCGTGAA CAGTTAGCTC ATAACCTTGG TTTCCACCGC GCTACGCGTA ATTCACTCGA TTCGGTTTCG GATCGTGATC ATGTGATGGA ACTGATGTCG GTGGCCTCGA TTTCTATGTT GCACCTTTCT CGTCTTGCAG AAGATATGAT CTTCTACAAC TCAGGGGAGT CTAACTTTAT TGAGTTAGCG GATACGGTGA CGTCTGGTTC GTCATTAATG CCACAGAAGA AAAATCCGGA TGCACTTGAG TTGATCCGTG GTAAGACAGG GCGTGTCTAT GGCGCATTAT CGAGCATGAT GATGACAGTG AAAGCCCTAC CATTGGCGTA CAACAAAGAC ATGCAAGAAG ATAAAGAAGG GTTGTTTGAT GCGTTAGACA CATGGAATGA TTGCATGGAA ATGGCAGCGC TGTGTTTTGA TGGCATTAAA GTAAATGGTG AGCGTACGCT TGAAGCTGCG AAGCAAGGGT ATGCGAACGC GACTGAGTTA GCTGATTACT TAGTGGCGAA AGGCATCCCA TTCCGTGAGG CGCACCATAT TGTGGGCGTA GCGGTGGTAG GGGCAATTGA TAAAGGCTGT GCGCTGGAAG AATTGTCTCT GCAAGAGCTA AAAACCTTCT CTGAGGTGAT TGAAGATGAT GTGTATGACA TTCTGACAAT AGAGTCTTGT TTGGAAAAAC GTTGTGCGCT GGGTGGCGTT TCGCCTCACC AAGTCGCTTA TGCGGTAGAG CAAGCGGATA AACGTCTGAG CCAGCGTGAC AGCTCGGCAG TGAAAGTGCG TCCTGCACGT TTGACGGACA TTGAAACACT AGAGGGCATG GTGGCTTATT GGGCGAACCT CGGTGAGAAT CTACCCCGCT CTCGTAATGA GCTCGTGAGA GATATTGGCT CCTTCGCGGT GGCAGAGCAT CATGGTGAAG TGACAGGTTG CGCTTCTCTA TATGTGTATG ACTCAGGGTT GGCTGAAATA CGCTCTCTTG GTATCGAAGC AGGCTGGCAA GGTCAAGGGC AGGGTAGTGC AATCGTAAAT CACTTGGTTG AGAAAGCACG TCAAATGGCG ATAAAGAAGG TCTTTGTCCT CACTCGAACG CCAGAGTTCT TTATGAAGCA GAGCTTCTTA CCAACATCGA AGTCGCTGTT GCCAGAAAAA GTCTTGAAAG ATTGCGATCA GTGTCCACGT CAGCACGCGT GTGATGAAGT GGCGCTAGAG ATCAATTTAA TGGAGCAAGT GATCCAAAAA TCGCATGTGG CATGA
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Protein sequence | MALWGGRFTQ AADTRFKEFN DSLRFDYRLA EQDIVGSIAW SKALLSVDVL SAEEQQKLEL ALNELKLEVM EDPHQILRSD AEDIHSWVEQ QLISKVGDLG KKLHTGRSRN DQVATDLKLW CRQQGQQLLI ALDRLQAQMV HVAKQHQGTV LPGYTHLQRA QPVTFAHWCL AYVEMFERDY SRLNDALQRL DTCPLGSGAL AGTAYPIDRE QLAHNLGFHR ATRNSLDSVS DRDHVMELMS VASISMLHLS RLAEDMIFYN SGESNFIELA DTVTSGSSLM PQKKNPDALE LIRGKTGRVY GALSSMMMTV KALPLAYNKD MQEDKEGLFD ALDTWNDCME MAALCFDGIK VNGERTLEAA KQGYANATEL ADYLVAKGIP FREAHHIVGV AVVGAIDKGC ALEELSLQEL KTFSEVIEDD VYDILTIESC LEKRCALGGV SPHQVAYAVE QADKRLSQRD SSAVKVRPAR LTDIETLEGM VAYWANLGEN LPRSRNELVR DIGSFAVAEH HGEVTGCASL YVYDSGLAEI RSLGIEAGWQ GQGQGSAIVN HLVEKARQMA IKKVFVLTRT PEFFMKQSFL PTSKSLLPEK VLKDCDQCPR QHACDEVALE INLMEQVIQK SHVA
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