| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002203 |
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| Symbol | |
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| ID | 8555876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 647232 |
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| End bp | 650399 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405240 |
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| Product | sensor histidine kinase |
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| Protein accession | YP_003284831 |
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| Protein GI | 262392977 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGCTA AACGGGAACA CATCACGTCG ATTGCTGATT TTATCGGAGC TCGTTACGGC
AAATCTCAAG GTTTGGCCGT AGTCGTTACA CTCATTGCGG TTGCGGGAAT TTTGCCGTAC
ATCGCTTTGC AGTTGCGTGG TATCACCATG GGGCTAGAAA TCATTGCCCC AGAACTGGCT
ACCGATTTTG GTTATCAAAA CGATAGCGTG TCGTGGTTTG TCGTGGTCGC ACTGGCAATT
TTTACCATGC TATTTGGTAC CCGGCACATT GATAACACGG AACACCATCG TGGGATGATG
ATGGCGATTG CCTTCGAATC GATTATCAAA CTGTTGGCGT TTTTAGTAGT CGGTGTATTC
ATTGTTTGGT TGGCGATGAA CACCGAGAGT TTGAGCTTAG TTGACGTTGC CACACAGACG
TATCAGTCAC CAAACATCCC TACCATATTG ATTCATACCG TACTCACGAT GCTGGCGATT
GTTTGTCTTC CACGACAATT CCATACGATG GTAGTGGAAA ATGAACGCGC GCAAGATTTG
CATGTTGCTC GTTGGTTGTT TCCCATTTAT CTGATCTTGA TGGGGATTTT TGTTTTACCT
ATTGCGTGGG TAGGGCAAGG GTTGTTGAGT GGTGCTTCGC CTGATACTTA TGTGATCAGT
GTTCCGATGT CGGTAGGGGC GAGTGAAATC GCTTTGCTTG CATTTTTAGG CGGCACTTCG
GCGGCCAGTG GCATGGTTAT CGTGTCGACG ATTGCCTTAG CGATCATGGT ATCGAACGAC
TTGGTTATGC CACTACTATT GCGTCGCATG CGATTGACGC AGCGTAACCA TCATCACTTC
TCTGAATTAT TACTGCGGAT CCGCCGTGGT CTGATTTTAG TCCTACTAAT TGGCGCTTGG
GGTTTTTATC AAGCGTTAGA TACCATTCAC TCACTTTCAG CGATCGGCTT TCTCTCATTT
GCGGCGATCA CGCAATTCGC GCCTGCGCTG GTGGGCGGTA TGTACTGGCG TCAAGGGAAT
AAGAAAGGTG TGTATGTTGG CTTGGCGGTA GGCTTTACCA TTTGGCTGAT TACGTTAATG
AGCCAAACGG ACATGCTTGC CGGGAATGCC AGTAACAACT TTTTGATTTG GTTGATCACC
CCACCAGAGG TATTGGCTGG CTTTGACATT GCGATTTCAG ATTGGGGGAT GATCCTCAGC
GTGGTCGCCA ATGCAGTATG TTTTGTTGTG GTTTCTATGA CCACACGACC AAGCCTAAGT
GAGCGCTTAC AATCGGCGTC ATTCGTTGGT ACGCCACTGC CTGAAAGCGA AAACATGAGC
CTGTACCAGA GTCGTGTTAC GGTTGCTGAA CTAGAAATGC TAGCGTCTAG GTTTGTTGGG
CGAACGCGAG TAAAAGCGGC TTTTCAAGCG TATTGGAGCC AGCAACGAGA AGAGCTAATG
CCGAATCAGC AGGCGCCATC TTCTCTGATT CGACATACCG AACGTGTATT AGCCGGGGTA
TTCGGTGCTT CTTCTGCTAA GTTAGTACTT ACTTCTGCCC TGCAAGGAAG AAACATGCAG
CTTGAAGAGG TGGCGACTAT CGTCGATGAA GCCTCTGAAC TGTACGATTT TAGCCGAGGC
CTACTTCAGG GGGCGATTGA ACATATCGGC CAAGGTATTG CGGTGGTCGA TAAGCAATTA
CGCTTGGTGG CTTGGAACCA ACGCTACTTA GAGTTATTTG AATTTCCGCC AGGCTTGATC
CAAGTTGGGC GACCGATTGC GGATGTGATT CGGCACAATG CAGAGCAAGG TTTATGTGGC
CCAGGCGATC CTGATGACCA CGTCCGTCGC CGTGTGTATC ACCTTGAGCA AGGGACTCGG
CACACTTCTT CTCGGGTCCG TCCCGATGGT CGCGTGATAG AGGTGCAAGG TAACCCAATG
CCAGGTGGTG GCTTTGTGAT GAGCTTTACC GACATCACCG TATTCCGAGA TGCAGAGCAA
GCGCTGAAAG ACGCCAATGA GACATTGGAA GAAAGGGTAC GTCTGCGGAC TCGGGAATTA
GAACAACTTA ACAAGCAGCT AGTGGCAGCG ACGCAGCGCT CCGATTTGGA ATCGAAGTCC
AAATCACGGT TCTTGGCGGC AGTAAGCCAT GATTTGATGC AGCCACTCAA CGCGGCTCGC
CTGTTCGCTT CTTCATTGTC GGAAGTAGCC AAAGACAGCG AAGCCAAAAA GCTGTCGGCA
CACATTGAGA GTGCTTTAGA GGCGGCCGAA GACCTGATAG GAGATTTGCT GGATATTTCG
CGCTTGGAGT CGGGCAAGCT GGAAGTCAAT GTGCACGGTT TTGCGTTAAA CGATGTGTTG
TCGAATTTGA ATGCGGAGTT CAGCGCATTA GCCAAGCAAC AAGGTATAGC ATTCACCATG
ATTCCATCCT CACTCATGGT GAAATCGGAT CCCAAACTGC TGCGCCGTGT GGTGCAAAAC
TTCCTGACTA ATGCGTTTCG TTATAACCCG AATGGCAAAG TGGCGCTCGG TGTTCGCCGG
GTAAAAGGGC GAGTGCGTAT TGATGTGTGG GACAACGGTG TAGGTATTGA AGAAGAGAAG
CAGCAAGAGA TCTTTGAAGA GTTTAATCGC GGAACTCAAG TTCGTTCCGA CCAAGGTCTC
GGGCTTGGTT TGGCGATTTC CAAGGGAATT GCTCAAGTGC TCGGGCATGA AATTTCGATG
CGTTCTTGGG TTGGGAAAGG CAGTGTCTTT TCTATCACGC TTGATAAAGC CGATCATGTG
CAGCCGCACC CAGTTCAAGT CACGACAAGT AACCAGTCTG AACTTGGTCA TCTAAGAATT
CTATGTGTGG ATAATGAGCC CGATATTTTA GTCGGTATGG AAAACTTACT GTCTCGATGG
GGCTGCGATA CGCGAGTGGC GACCGATTTG GTCGAAAGTC TACAAGCTCT CGAGGATGGT
TGGATTCCGG ACGTGATTTT TTCCGATTAC CGACTTGATG ATGGTCGTAC TGGCTTGGAA
GTGCTACAGC AATGTCGCTT GAGGCTAGGC AGCTGCTTTG AAGGTGTCAT CATCAGCGCG
GATCGCACCG ATGATATGCT TGATGGCATC AAGGCAAATG GGTTCAGCTT TATTGCGAAG
CCAGTTAAGC CGCTTAAATT GCGTTCGGTG CTCAACCGCG TCGCATAG
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| Protein sequence | MIAKREHITS IADFIGARYG KSQGLAVVVT LIAVAGILPY IALQLRGITM GLEIIAPELA
TDFGYQNDSV SWFVVVALAI FTMLFGTRHI DNTEHHRGMM MAIAFESIIK LLAFLVVGVF
IVWLAMNTES LSLVDVATQT YQSPNIPTIL IHTVLTMLAI VCLPRQFHTM VVENERAQDL
HVARWLFPIY LILMGIFVLP IAWVGQGLLS GASPDTYVIS VPMSVGASEI ALLAFLGGTS
AASGMVIVST IALAIMVSND LVMPLLLRRM RLTQRNHHHF SELLLRIRRG LILVLLIGAW
GFYQALDTIH SLSAIGFLSF AAITQFAPAL VGGMYWRQGN KKGVYVGLAV GFTIWLITLM
SQTDMLAGNA SNNFLIWLIT PPEVLAGFDI AISDWGMILS VVANAVCFVV VSMTTRPSLS
ERLQSASFVG TPLPESENMS LYQSRVTVAE LEMLASRFVG RTRVKAAFQA YWSQQREELM
PNQQAPSSLI RHTERVLAGV FGASSAKLVL TSALQGRNMQ LEEVATIVDE ASELYDFSRG
LLQGAIEHIG QGIAVVDKQL RLVAWNQRYL ELFEFPPGLI QVGRPIADVI RHNAEQGLCG
PGDPDDHVRR RVYHLEQGTR HTSSRVRPDG RVIEVQGNPM PGGGFVMSFT DITVFRDAEQ
ALKDANETLE ERVRLRTREL EQLNKQLVAA TQRSDLESKS KSRFLAAVSH DLMQPLNAAR
LFASSLSEVA KDSEAKKLSA HIESALEAAE DLIGDLLDIS RLESGKLEVN VHGFALNDVL
SNLNAEFSAL AKQQGIAFTM IPSSLMVKSD PKLLRRVVQN FLTNAFRYNP NGKVALGVRR
VKGRVRIDVW DNGVGIEEEK QQEIFEEFNR GTQVRSDQGL GLGLAISKGI AQVLGHEISM
RSWVGKGSVF SITLDKADHV QPHPVQVTTS NQSELGHLRI LCVDNEPDIL VGMENLLSRW
GCDTRVATDL VESLQALEDG WIPDVIFSDY RLDDGRTGLE VLQQCRLRLG SCFEGVIISA
DRTDDMLDGI KANGFSFIAK PVKPLKLRSV LNRVA
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