Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002194 |
Symbol | |
ID | 8555867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 635936 |
End bp | 636799 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405231 |
Product | tRNA dihydrouridine synthase B |
Protein accession | YP_003284822 |
Protein GI | 262392968 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000238553 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTCA GTGAAATGAT GTCTGCTAAC CCAAAACTAT GGGGAACGTC AAAGTCGAAA CAGCGCATGG TACACGAGGG CGAATCGGGC ATTCGCTCTG TACAGATTGC GGGTTCCGAT CCACAGCTTA TGGCGGACGC AGCTCAATTC AGTGTTGAGA ACGGTGCACA AATCATCGAC ATCAACATGG GCTGCCCGGC AAAAAAAGTG AATAAGAAGC TAGCGGGCTC TGCTCTGCTT CAATACCCAA ACATTATCGA AGAGATTTTG AAAGCGGTCG TGAATGCAGT GGACGTTCCT GTAACGTTAA AGACTCGAAC TGGCTGGGAT ACAGACAACA AGAACTGTGT CCAGATCGCT AAATTAGCCG AAAACTGCGG CATACAAGCT CTTGCTCTGC ATGGCAGAAC GAAAGCATGT ATGTACAAAG GTGAGGCCGA ATATGACAGC ATTAAAGCGG TAAAAGAGGC GATTTCAATT CCGGTTATCG CGAACGGTGA TATCGATAGC CCGGAGAAAG CCAAATTTGT ACTGGAGTAC ACCGGTGCGG ACGCTTTAAT GATTGGACGC CCTGCCCAGG GTCGTCCGTG GATTTTCCAG GAAATCCATC ACTATTTGGA AAACGGCACC ACAATGGAGG AGCTTCCAAC TGAGGAAGTG AAAACCATTA TGCTTGGTCA TGTAAATGCT CTGCATGAAT TTTATGGGGA GTACTTAGGC CCACGTATCG CGCGCAAGCA CGTTGGGTGG TACCTAAAAG AGCATGAACA GGCAAGTGAG TTTCGCCGTA CCTTCAACGC TATCGACGCA GCTCCGCTGC AAATTGAGGC GTTAGAAGGT TATTTTGATA ACGTTGCATC ATAA
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Protein sequence | MAVSEMMSAN PKLWGTSKSK QRMVHEGESG IRSVQIAGSD PQLMADAAQF SVENGAQIID INMGCPAKKV NKKLAGSALL QYPNIIEEIL KAVVNAVDVP VTLKTRTGWD TDNKNCVQIA KLAENCGIQA LALHGRTKAC MYKGEAEYDS IKAVKEAISI PVIANGDIDS PEKAKFVLEY TGADALMIGR PAQGRPWIFQ EIHHYLENGT TMEELPTEEV KTIMLGHVNA LHEFYGEYLG PRIARKHVGW YLKEHEQASE FRRTFNAIDA APLQIEALEG YFDNVAS
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