Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002155 |
Symbol | |
ID | 8555810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 572097 |
End bp | 573206 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405174 |
Product | tRNA (Uracil54-C5-)-methyltransferase |
Protein accession | YP_003284783 |
Protein GI | 262392929 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000210223 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACTC TTGATGTAAA CCCACAACGC TACCAAGAAC AACTGGCTGA AAAAGTCGAA CGTCTCACGG ATATGTTCGC GCCATACAAC ATGCCAGAAC TGGAAGTGTT TGAATCACCA GAGCAGCACT ACCGCATGCG TGCTGAGTTC CGTGTTTGGC ATGAAGGCGA AGATCTTTAC TACATCATGT TCAACCAAGA AACTCGTGAG AAATACCGTG TTGACCAATT TCCTGCAGCA AGCCGTCTGA TCAACGATCT GATGCCGCTA TTGGTTGAAG CGATGAAAGA CAACGACTCG CTACGTCGTA AACTGTTCCA GGTGGATTTC CTATCGACGC TAAGTGGTGA GATTCTGGTT TCACTCCTTT ACCATCGCCA ACTTGATGAA GAGTGGATTG AAAACGCGAA AGCCCTTAAA CAGCGCTTAA ATGATGAAGG CTTCAACCTA AACATCATTG GTCGTGCTCG TAAGATGAAG ATTGTCCTAG ACCGCGACTA CGTGATCGAG AAGCTCGATG TAAATGGTCA AAGCTACATC TACCAACAAG TAGAGAACAG CTTCACTCAG CCGAACGGCA AAGTCGCAGA GAAGATGCTG GAATGGGCGG TCGACTGTAC CCAAGAAAGC ACTGGCGACC TACTAGAGCT TTACTGTGGT AACGGTAACT TCTCGCTGGC GCTGGCACAG AATTTCGACC GCGTCCTGGC AACTGAGCTA GCTAAACCAT CGGTTGTATC TGCACAGTAC AACATCGCTG CCAATAAGAT TGATAACGTA CAAATCTTAC GTCTATCAGC AGAGGAATTT ACTCAAGCGA TCGAAGGTAA GCGTGAATTC CGTCGTCTAC AAGATGCAGG TGTGGATCTG AAGAGCTACA ACTGCAACAC GATTTTTGTC GATCCACCAC GTGCTGGGAT GGATGCCGAT ACTTGTAAAA TGGTGCAAGG TTACGAGCGC ATCATGTACA TCTCTTGTAA CCCTGAGACT CTAAAAGAGA ACTTGGACAT TCTATGCGAA ACACACAACG TGACGCGTTT TGCTCTGTTT GACCAATTCC CTTATACCCA CCATATGGAA GCGGGCGTGC TATTGGAACG CAAAGCGTAA
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Protein sequence | MATLDVNPQR YQEQLAEKVE RLTDMFAPYN MPELEVFESP EQHYRMRAEF RVWHEGEDLY YIMFNQETRE KYRVDQFPAA SRLINDLMPL LVEAMKDNDS LRRKLFQVDF LSTLSGEILV SLLYHRQLDE EWIENAKALK QRLNDEGFNL NIIGRARKMK IVLDRDYVIE KLDVNGQSYI YQQVENSFTQ PNGKVAEKML EWAVDCTQES TGDLLELYCG NGNFSLALAQ NFDRVLATEL AKPSVVSAQY NIAANKIDNV QILRLSAEEF TQAIEGKREF RRLQDAGVDL KSYNCNTIFV DPPRAGMDAD TCKMVQGYER IMYISCNPET LKENLDILCE THNVTRFALF DQFPYTHHME AGVLLERKA
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