| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002151 |
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| Symbol | |
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| ID | 8555806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 567923 |
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| End bp | 569272 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405170 |
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| Product | DNA-damage-inducible protein F |
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| Protein accession | YP_003284779 |
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| Protein GI | 262392925 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.539092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAAATT CAATCTTCTC TCCTTTATCT AATCCAAAAG TTCATCGCCA AGTCTTAGCT
TTAGCGATAC CTATGGTGCT GTCGAATATT ACTGTTCCAT TGCTCGGTTT GGTCGATGCT
GCGGTGATTG GTCATCTAGA CCACGCTTGG TATTTGGGCG GTGTTGCGCT GGGCAGTACC
ATGATCAGTG TGACATTTTG GCTGCTTGGT TTTTTGCGTA TGTCGACTAC TGGGTTGGCG
GCGCAGTCCT ATGGCGGTGA AGACCGAAAG CAACTTGCCT TGGTGTTTAT GCAAGGCTCA
CTCATGGCAC TGCTGTTTGC GTTAGTCTTC TTTATTGCCC ATAACCCGAT TGCTGATTTG
ATCTTTGGTT GGAGTGACGC CAGTGCTGAA GTGAAGCACT ACGGCATGCA ATATTTCTCT
ATCCGTGTGT GGAGTGCCCC CGCTGCGCTA ATGAACTTTG TGTTGTTGGG GTGGTTGCTC
GGAACGCAAA ATTCCAAAGC CCCAATGTGG ATGGTGATCA TCACCAACGT GACTAATATT
GCCCTCGATT TGTTGTTTGT GATTGGTTTG GGATGGAAAG TAGAAGGCGC TGCGCTGGCA
TCGGTGATTG CTGACTACTC AGGCATGGGT TTTGGTCTCA TGTGTGTCTG GAAAACCTGG
CGAGAGAGGC AATTACCATC ACCTCAAAAG CTGCTAGCCA GCACTCAACA CGGGTTCGGA
CGCTTCGTGA AATTGAATCG CGATATTTTC TTACGCTCTT TGTGTCTGCA AGCGGCTTTT
AGCTTTATGA CGTTCCAAGG CGCAAGCTTT GGTGATGAGG TTGTCGCTGC AAATGCGGTT
CTGATGAGCT TCCTGATGAT TATCTCGTAT GGCATGGATG GCTTTGCTTA TGCAATGGAG
GCCATGGTCG GGAAGGCGAT TGGCGCCAAA GATAGGCAAC AATTGAGTGC ATCACTTGTC
GGTACTTTTT TTTGGAGTTT GGTTATTTGC TTAGGACTGA CCGCGCTCTT TGGTTTGGCG
GGATCGCAGT TGATCGCCAT GATCACTTCA ATTGAGGCTG TACAACAGCA AGCAGCGGTG
TATCTACCTT GGCTGGTGGT GATGCCACTT GCGTCGATGT GGTGCTTTCT ATTGGATGGC
ATTTTTGTCG GTGCAACCAA AGGCAAAGAC ATGCGCAATA GTATGTTTGT CGCGACCAGC
AGTTTCTTCG TTGTCTTTTA TTTGTTCGCC GAGTGGGAAA ATCACGCTCT GTGGTTTGCA
ATGACGAGCT TTATGTTGAT GCGGGGTATT GGCTTAGGGG TTATCTTTCT CTACCAATGG
CGTAAGGATA CCTTCCTCGC ACAATGTTGA
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| Protein sequence | MTNSIFSPLS NPKVHRQVLA LAIPMVLSNI TVPLLGLVDA AVIGHLDHAW YLGGVALGST
MISVTFWLLG FLRMSTTGLA AQSYGGEDRK QLALVFMQGS LMALLFALVF FIAHNPIADL
IFGWSDASAE VKHYGMQYFS IRVWSAPAAL MNFVLLGWLL GTQNSKAPMW MVIITNVTNI
ALDLLFVIGL GWKVEGAALA SVIADYSGMG FGLMCVWKTW RERQLPSPQK LLASTQHGFG
RFVKLNRDIF LRSLCLQAAF SFMTFQGASF GDEVVAANAV LMSFLMIISY GMDGFAYAME
AMVGKAIGAK DRQQLSASLV GTFFWSLVIC LGLTALFGLA GSQLIAMITS IEAVQQQAAV
YLPWLVVMPL ASMWCFLLDG IFVGATKGKD MRNSMFVATS SFFVVFYLFA EWENHALWFA
MTSFMLMRGI GLGVIFLYQW RKDTFLAQC
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