| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002111 |
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| Symbol | |
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| ID | 8555766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 533495 |
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| End bp | 534325 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646405130 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003284739 |
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| Protein GI | 262392885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTCC ACTTTTCCAA AATGCACGGT TTGGGCAACG ACTTCATGGT CGTCGACTGT
ATTACCCAGA ACGTGTTTTT CTCGCAAGAC CTGATCCGCC GTTTGGCGGA TCGTCATACC
GGCGTTGGTT TTGACCAATT GCTCGTGGTA GAAGCCCCTT ACGACCCTGA AACTGATTTC
CATTATCGGA TTTTCAATGC CGATGGTAGT GAAGTCGAGC AGTGCGGGAA TGGCGCGCGC
TGCTTCGCGC GCTTTGTTCG CTTGAAAGGG TTGACCAATA AATACAGCAT CAGCGTAAGC
ACCAAAAAAG GAAAGATGAT TCTCAACATC GAAGATGATG GAGAAGTGAC GGTCAACATG
GGTGTGCCAG AGTTTGAGCC GAACAAAATT CCTTTCAAAG CCAAGCAAAA AGAGAAAACC
TACATCATGC GCGCTGGTGA AAAAACGCTG TTCTGTGGCG CGGTAAGCAT GGGTAACCCG
CATGTGGTGA CGGTGGTCGA TGACGTGGAT ACTGCTGATG TCGATACATT AGGCCCGCTG
CTTGAGTCGC ACGAGCGTTT CCCAGAGCGC GTCAACGCTG GCTTTATGCA GGTGGTGAGT
CGTGACCATA TTCGTCTTCG AGTTTACGAG CGAGGCGCAG GTGAAACACA AGCTTGTGGT
AGTGGCGCAT GCGCGGCGGT AGCGGTAGGG ATTCTTCAGG GTCTGCTGGA TGAAAACGTT
AAGGTTTCTC TACCAGGTGG TGAACTGCGA ATTGCGTGGC AAGGTCCGGG TAAGCCGTTG
TTTATGACCG GACCTACAAC GCATGTATTT GATGGTCAAT TGTCTTGCTA G
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| Protein sequence | MHFHFSKMHG LGNDFMVVDC ITQNVFFSQD LIRRLADRHT GVGFDQLLVV EAPYDPETDF
HYRIFNADGS EVEQCGNGAR CFARFVRLKG LTNKYSISVS TKKGKMILNI EDDGEVTVNM
GVPEFEPNKI PFKAKQKEKT YIMRAGEKTL FCGAVSMGNP HVVTVVDDVD TADVDTLGPL
LESHERFPER VNAGFMQVVS RDHIRLRVYE RGAGETQACG SGACAAVAVG ILQGLLDENV
KVSLPGGELR IAWQGPGKPL FMTGPTTHVF DGQLSC
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