| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002105 |
|---|
| Symbol | |
|---|
| ID | 8555760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 527050 |
|---|
| End bp | 527778 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646405124 |
|---|
| Product | uroporphyrinogen-III synthase |
|---|
| Protein accession | YP_003284733 |
|---|
| Protein GI | 262392879 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.939405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGT TGGTCACTCG GCCGGGAGAG CAAGGCAACG CGCTTTGCTC TCTGCTCGAA
AGGCACGGCA TTTCCGCATA TCACCATCCT CTGATCGACA TTGTCGCCGA TCTCACGGAC
ACGCACCTCT CTAAACATCT ACATCAAGCT CAAATTGTTA TCGCTGTTAG TCGACATGCA
GTGCAATGTG CACAGCAAAT CTTAGCCAGC AACGGGATGT CATGGCCGAA ACAAGCCATT
TACCTTGCCG TTGGTCAAAA AACAGCACAC TATTTAAGCA AATGTACCCA ACAGAAAGTA
CACTATCCCC AAGTCAGTGA TAGTGAACAC TTATTGCGAC TGCCAGAGCT CAACAATGTG
GCCCAACAAC AAGTTCTTAT CCTTCGTGGT AACGGCGGAA GAGAGCTGAT CAAAGATGCA
TTGGTGAGAC GTGGCGCAAA AGTTCACTAT AGTGAGACTT ACAAGAGAGA ATTCATCCCA
TTCGATCCAG TAAGCTGTGT CTCACTATGG AAAACCCTAC AAATTGACCA GATCATCGTC
ACCAGTGGTG AGCAACTGGA TTATTTGTGC AGCCAATTGA CGTCAGAGCA ATTGACTTGG
CTTAATCAAC AAGAGTTGTA TATCCCCAGT CAGCGTATCG CTGACATCGC ACTTCAAAGG
GGGTTCACTC GGGTGAGATG CACGGGAAGC GCATCCAACC AAGAATTACT GGCGGCTCTC
CAGCCCTAG
|
|---|
| Protein sequence | MAVLVTRPGE QGNALCSLLE RHGISAYHHP LIDIVADLTD THLSKHLHQA QIVIAVSRHA
VQCAQQILAS NGMSWPKQAI YLAVGQKTAH YLSKCTQQKV HYPQVSDSEH LLRLPELNNV
AQQQVLILRG NGGRELIKDA LVRRGAKVHY SETYKREFIP FDPVSCVSLW KTLQIDQIIV
TSGEQLDYLC SQLTSEQLTW LNQQELYIPS QRIADIALQR GFTRVRCTGS ASNQELLAAL
QP
|
|---|
| |