| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002079 |
|---|
| Symbol | |
|---|
| ID | 8555728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 493142 |
|---|
| End bp | 494083 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646405092 |
|---|
| Product | LysR-family transcriptional regulator |
|---|
| Protein accession | YP_003284707 |
|---|
| Protein GI | 262392853 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGTCG AAAAACTGGC TCGTATCGAT TTAAATCTAT TGGTCTGTTT TAAAGTTTTG
ATAGAAGAGT TAAATGTCAC CCGAGCCGCC CACCGACTGT GCTTGAGTCA GTCTGCCGTG
AGCAAATCAC TGGCTAAACT GCGCATCCAA TTTGATGACC CGCTTTTCAC CCGAAACTCG
CATGGATTAA CACCAACGCC GCGCGCATTG TTTCTTAAGC CGAAACTGGA TCTGTTGATA
AACCAGTTAG AAGTACTGAC TCAACCAGAA GAGTTCTCTC CACAAAGTAG CGAATACCGT
TTTCAAATAG CAGCGGTTGA AAGTGTTTAC CCTCTGATTC TACCTCATTT CTTACCGGCG
ATTTTTCAGC AAGCCCCTGG GGTAACGATC AGCACTCACC CTTGGTCCGA TAATACTTTT
AAAATGCTGC AACGTGGCGA GCTAGACTTA GGCTTAACTG GAAAAGATAT CGATATTAAT
GATGCCAAGC TGACTCTGCT GCCACCCGAT GACATATGCG AACTGGAAAT TTATCGAGAT
CACCAGATGT GTATTATTCG CAAAAATCAC CCAGCATTAA AACAGCCTTG GAACCTCGAA
GCGTATCTCG CCCTGCGTCA CGTACAAGTG CGTTGTGACG GCAACGACCG TTGGCTGTTA
GATTATCGCC TTGCCGATAT TGGAGCCGAC CGCGATATTG CCGTCACCGT TCCGGACTTT
AATAGTGCCG CAAGTTTATG TTCCTACACT GACTTTATTT TTACCGCCCC AAGCCATTTT
GTGCAGCTCG CTGCTAAACA GCTTGATTTG GTCGTACTAC CACTCCCGCT AGAATTTCCA
CCTATGGCTT ACACTTTATT CTGGCACCGA GACAGAGAAA ACGACCCTGC ATTGGGTTGG
CTACGTACGA TGATCACACA AAAAACCGAT CACCTTAGAT AA
|
|---|
| Protein sequence | MNVEKLARID LNLLVCFKVL IEELNVTRAA HRLCLSQSAV SKSLAKLRIQ FDDPLFTRNS
HGLTPTPRAL FLKPKLDLLI NQLEVLTQPE EFSPQSSEYR FQIAAVESVY PLILPHFLPA
IFQQAPGVTI STHPWSDNTF KMLQRGELDL GLTGKDIDIN DAKLTLLPPD DICELEIYRD
HQMCIIRKNH PALKQPWNLE AYLALRHVQV RCDGNDRWLL DYRLADIGAD RDIAVTVPDF
NSAASLCSYT DFIFTAPSHF VQLAAKQLDL VVLPLPLEFP PMAYTLFWHR DRENDPALGW
LRTMITQKTD HLR
|
|---|
| |