Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002072 |
Symbol | |
ID | 8555721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 484687 |
End bp | 486627 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405085 |
Product | thiamin biosynthesis protein ThiC |
Protein accession | YP_003284700 |
Protein GI | 262392846 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTC GCAAACAAGC GAGACTGGAA GCAAAACAGT TCATTGAAAC ACTCTCGGTA CAGCCGTACC CAAATTCCAC AAAAGTATAT GTAGAAGGTT CACGTCCAGA TGTTCGTGTA CCTATGCGTG AAATAGCGCT AGCAGATAGC CTGATTGGTG GCACAAAAGA AGCGCCAATC TTCGAGCCTA ATGAGCCAGT ACGCGTTTAC GATACCTCTG GAGTATACAC TGACCCAGAA CACACCATAG ATCTTTATAA CGGCTTACCT AAGTTAAGAG AAAGCTGGAT TGAAGAGCGC GGTGACACAG AGTTACTCGA TGAAGTAAGC TCGGTGTACA CCAAAGAACG CTTAGAAGAC GAAACACTAG ACGATCTTCG TTACGGTAAT CTACCACGTA TTCGACGTGC CAAAGATGGG CAGTGCGTCA CTCAGCTGCA CTATGCTCGC AAAGGCATTA TTACCCCAGA AATGGAATTC ATCGCGCTGC GTGAAAACAT GGGTCGTGCC AAGTACCGTG ATGATGTACT GAATCAACAG CATCCTGGTC AAAGCTTTGG AGCGAATCTT CCAAAAGACA TTACCGCCGA GTTTGTTCGC AAAGAAGTTG CCGAAGGTCG CGCTATTATC CCTTCTAATA TCAACCACCC AGAATCCGAA CCAATGATCA TTGGACGTAA CTTTTTGGTC AAAGTAAACG CCAATATTGG TAACTCATCG GTGACGTCTT CGATTGAGGA AGAGGTTGAG AAGCTAGTGT GGGCGACACG CTGGGGTGGC GATACTGTTA TGGATCTCTC CACAGGTCGC AATATTCATG AAACTCGAGA ATGGATTCTG CGTAACAGCC CGGTTCCGAT CGGTACCGTA CCTATGTACC AAGCGCTTGA GAAAGTGAAT GGTGTTGCGG AAAACCTTAA CTGGGAAGTG ATGCGCGATA CTCTGATTGA GCAAGCAGAG CAGGGTGTTG ATTACTTCAC TATCCATGCT GGCTTACTAC TGCGCTATGT ACCAATGACA GCAAAACGCG TTACCGGCAT CGTCTCTCGT GGTGGTTCTA TCATCGCGAA ATGGTGTTTA GCACATCACC AAGAAAGCTT CTTATATACC CACTTCCGAG AGATCTGTGA AATCTGTGCC AAGTATGATG TTGCACTTTC TCTCGGTGAT GGTCTGCGCC CTGGTTCGGT TGCCGATGCT AACGATGAAG CGCAATTTGC GGAGCTTCGT ACCCTTGGCG AGTTGACTAA GGTTGCGTGG GAATACGACG TACAGGTCAT TATCGAAGGT CCTGGCCATG TTCCAATGCA CATGATCAAA GAGAACATGG AAGAGCAGCT AGAGCACTGC CATGAAGCTC CGTTCTACAC CCTTGGTCCA CTGACGACAG ACGTCGCTCC TGGTTACGAC CATATTACGT CAGGTATTGG CGCTGCCATG ATTGGCTGGT ATGGCTGTGC GATGCTTTGT TACGTAACAC CTAAAGAGCA TCTTGGCTTA CCAAACAAAG AAGACGTGAA GGTAGGCATG ATCACTTACA AGCTTGCTGC TCACGCTGCT GATTTGGCGA AAGGGCACCC TGGCGCACAA GTTCGTGATA ACGCGCTTTC TAAAGCACGT TTTGAATTCC GCTGGGAAGA CCAATTCAAC TTGTCACTCG ACCCAGAAAC CGCTCGCGCT TTCCATGATG AAACCTTGCC TCAAGAGTCT GGAAAAGTTG CTCACTTTTG TTCGATGTGT GGACCAAAGT TCTGCTCGAT GAAGATTTCG CAAGAGGTAC GAGAGTACGC GAAAGACACT GAGCAAGTTG CCGCGGACCA AGCTATCTCG ATCAAAATGC TTGATGATCC TCTTGAGGGG ATGCGTCAGA AATCGCAAGA ATTTAGAGAG TCAGGTTCTG AGTTATACCA CCCAGCAGCA CATGCCGAGG TAAGTGATTA A
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Protein sequence | MSSRKQARLE AKQFIETLSV QPYPNSTKVY VEGSRPDVRV PMREIALADS LIGGTKEAPI FEPNEPVRVY DTSGVYTDPE HTIDLYNGLP KLRESWIEER GDTELLDEVS SVYTKERLED ETLDDLRYGN LPRIRRAKDG QCVTQLHYAR KGIITPEMEF IALRENMGRA KYRDDVLNQQ HPGQSFGANL PKDITAEFVR KEVAEGRAII PSNINHPESE PMIIGRNFLV KVNANIGNSS VTSSIEEEVE KLVWATRWGG DTVMDLSTGR NIHETREWIL RNSPVPIGTV PMYQALEKVN GVAENLNWEV MRDTLIEQAE QGVDYFTIHA GLLLRYVPMT AKRVTGIVSR GGSIIAKWCL AHHQESFLYT HFREICEICA KYDVALSLGD GLRPGSVADA NDEAQFAELR TLGELTKVAW EYDVQVIIEG PGHVPMHMIK ENMEEQLEHC HEAPFYTLGP LTTDVAPGYD HITSGIGAAM IGWYGCAMLC YVTPKEHLGL PNKEDVKVGM ITYKLAAHAA DLAKGHPGAQ VRDNALSKAR FEFRWEDQFN LSLDPETARA FHDETLPQES GKVAHFCSMC GPKFCSMKIS QEVREYAKDT EQVAADQAIS IKMLDDPLEG MRQKSQEFRE SGSELYHPAA HAEVSD
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