| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002065 |
|---|
| Symbol | |
|---|
| ID | 8555705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 472841 |
|---|
| End bp | 473398 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646405069 |
|---|
| Product | YrdC family protein |
|---|
| Protein accession | YP_003284693 |
|---|
| Protein GI | 262392839 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.694724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATAACT TTGAACAAGT GCTCAACGCA CTACAACAAG GCGAAGTGAT TGCCTACCCA
ACAGAAGGGG TTTTTGGTGT CGGATGCGAT CCAGATAACC CAGAAGCAAT TCAAAAACTG
CTGGAGCTCA AGCAGCGCCC GGTGGAAAAA GGGCTGATTC TGATCGCTGC AAGTTATGAG
CAGCTCTTGC CATATATTGA TGAATCTCAA CTGACTCCAG AACAATTAGC GACCGTTCAT
GCAACTTGGC CTGGTCCATA CACTTGGATC ATGCCAGCGA GCGATAAAGT CTCCAACTGG
GTTTCAGGGC AATTTGATTC AATTGCAGTT CGTGTGACTG ATCATCCTTT GGTTCAAAAG
ATGTGTAATG CATTCGGAAA GCCGTTAACC TCTACCAGCG CGAATCTTTC CGGCTTGCCA
CCGTGTATGA ACACGGAAGA GGTAGAGCAG CAATTGGGTG ATAAGCTGGT GGCCATTCTT
CGTGGTGAAA CCAGCGGCCG TGATAAACCC AGCGAGATTC GTGACGCCAA GACTTCACAA
ATATTAAGAC AGGGCTAA
|
|---|
| Protein sequence | MDNFEQVLNA LQQGEVIAYP TEGVFGVGCD PDNPEAIQKL LELKQRPVEK GLILIAASYE
QLLPYIDESQ LTPEQLATVH ATWPGPYTWI MPASDKVSNW VSGQFDSIAV RVTDHPLVQK
MCNAFGKPLT STSANLSGLP PCMNTEEVEQ QLGDKLVAIL RGETSGRDKP SEIRDAKTSQ
ILRQG
|
|---|
| |