| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002057 |
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| Symbol | |
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| ID | 8555697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 466980 |
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| End bp | 467498 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405061 |
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| Product | peptide deformylase |
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| Protein accession | YP_003284685 |
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| Protein GI | 262392831 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.424393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTAT TACAAGTATT AACATTCCCG GATGATCGCC TGCGCACAGT CGCAAAGCCT
GTTGAAGCGG TGACGCCTGA GATTCAAAAA ATCGTCGATG ACATGATTGA AACCATGTAC
GACGAAGAAG GTATTGGCCT TGCTGCAACG CAGGTTGATA TCCACAAACG TATCGTAGTG
ATTGATATTT CAGAAACTCG CGATGAGCCG ATGGTGCTAA TCAACCCTGA GATTCTGGAA
AAGCGTGGCG AAGATGGCAT CGAAGAAGGC TGTCTGTCGG TACCAGGTGC ACGCGCACTT
GTGCCTCGCG CTGCAGAAGT TACCGTTAAA GCACTGGATC GTGATGGCAA AGAGTTCACC
TTTGAAGCCG ACGACCTGCT AGCGATTTGT GTTCAACACG AGCTTGATCA CTTACAAGGT
AAGCTGTTCG TGGATTACCT ATCGCCACTG AAACGCAAAC GCATTCAGGA CAAGCTAGCG
AAAATCAAAC GCTTTAACGA GAAGCAGCAA AACGCTTAA
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| Protein sequence | MSVLQVLTFP DDRLRTVAKP VEAVTPEIQK IVDDMIETMY DEEGIGLAAT QVDIHKRIVV
IDISETRDEP MVLINPEILE KRGEDGIEEG CLSVPGARAL VPRAAEVTVK ALDRDGKEFT
FEADDLLAIC VQHELDHLQG KLFVDYLSPL KRKRIQDKLA KIKRFNEKQQ NA
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