Gene VEA_002056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002056 
Symbol 
ID8555696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp465999 
End bp466946 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content51% 
IMG OID646405060 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_003284684 
Protein GI262392830 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTCAGT CTTTACGTAT TGTCTTTGCA GGTACTCCGG ATTTCGCCGC CCGTCACTTG 
GCGGCGTTGT TGTCTTCGGA GCATGAAGTC ATCGCGGTTT ACACAAACCC AGATCGTCCA
GCGGGTCGTG GCAAGAAATT GGCTGCGCCA CCGGTAAAAC AACTGGCGCT GGAACACAAC
ATCCCGGTTT ACCAACCTGA AAGCTTTAAG TCCGACGAAG CGAAACAAGA ACTTGCCGAT
CTGAACGCCG ATCTCATGGT TGTCGTGGCG TACGGTATGC TACTACCACA AGCGGTTCTT
GATACCCCTA AACTGGGTTG TATCAACGTA CATGGTTCTA TCCTACCTCG TTGGCGTGGT
GCGGCTCCAA TCCAACGCTC TATTTGGGCG GGCGATGCAG AAACTGGCGT GACCATCATG
CAGATGGACA TCGGTCTCGA CACAGGAGAT ATGCTGAAGA TTGCAACGCT GCCAATCGAA
GCGACAGATA CCAGCGCTTC AATGTACGAA AAATTGGCTG AGCTTGGCCC AGAAGCCCTG
ATTGACTGCC TAGCAGACAT CGCAACAGGT AAAGCTGAGC CAGTGAAGCA AGATGACGAG
CTTGCAAACT ACGCGAAGAA GCTAAGCAAA GAAGAAGCAC GCATTAACTG GAATGACGAC
GCGGCACACA TTGAGCGTTG CGTTCGCGCA TTCAACCCAT GGCCAATGAG CCACTTTGAA
GCGGCTGAAA ACAGCATCAA AGTATGGCAA AGCCGTGTGG CGGAACAAAC CAGTGACAAG
CCAGCGGGCA CTATTGTGCA AGCAGATAAA ACTGGTATTT ATGTTGCGAC AGGCAACGGC
GTACTGGTGC TAGAACAACT GCAAGTTCCT GGCAAAAAAG CCATGTCAGT TCAGGATATT
CTGAATTCGC GTGCGGCTTG GTTTGAAGTT GGTACTCTGC TGGTTTAA
 
Protein sequence
MSQSLRIVFA GTPDFAARHL AALLSSEHEV IAVYTNPDRP AGRGKKLAAP PVKQLALEHN 
IPVYQPESFK SDEAKQELAD LNADLMVVVA YGMLLPQAVL DTPKLGCINV HGSILPRWRG
AAPIQRSIWA GDAETGVTIM QMDIGLDTGD MLKIATLPIE ATDTSASMYE KLAELGPEAL
IDCLADIATG KAEPVKQDDE LANYAKKLSK EEARINWNDD AAHIERCVRA FNPWPMSHFE
AAENSIKVWQ SRVAEQTSDK PAGTIVQADK TGIYVATGNG VLVLEQLQVP GKKAMSVQDI
LNSRAAWFEV GTLLV