Gene VEA_002038 details

Gene Information

• Locus tag: VEA_002038
• ID: 8555678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: -
• Start bp: 446425
• End bp: 448266
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 646405042
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_003284666
• Protein GI: 262392812
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAT ATAGATCAGC AACCACAACA CATGGTCGTA ACATGGCGGG TGCACGAGCA 
CTATGGCGTG CAACGGGTGT GAAAGAAGAA GACTTCGGTA AACCAATCAT TGCCGTCGTA 
AACTCGTTTA CTCAATTTGT TCCGGGTCAC GTACACCTAA AAGACATGGG TCAGCTTGTC 
GCACGTGAAA TCGAAAAAGC CGGCGGCATC GCAAAAGAAT TCAACACCAT CGCGGTTGAT 
GATGGTATTG CAATGGGTCA CGGCGGCATG CTGTACTCAC TGCCTTCACG CGAACTAATC 
GCAGACTCAG TAGAATACAT GGTCAACGCG CACTGTGCCG ATGCCATGGT ATGTATCTCT 
AACTGTGACA AAATCACTCC GGGAATGTTG ATGGCATCGA TGCGTCTTAA CATCCCTGTT 
ATCTTTGTTT CTGGTGGCCC AATGGAAGCG GGTAAAACCA AGCTTTCTGA TCAGATCATC 
AAACTAGACC TTGTTGATGC AATGATCCAA GGCGCGGATC CAAAAGTATC TGATGAGCAA 
AGCGAGCAGA TCGAACGCAG CGCATGTCCA ACCTGTGGAT CGTGTTCAGG CATGTTCACG 
GCAAACTCGA TGAACTGTCT AACGGAAGCG CTGGGTCTTT CTCAGCCGGG CAACGGTTCT 
ATGCTGGCGA CGCACGCAGA CCGTGAACAA CTGTTTCTTA ATGCAGGTCG TCGCATCGTT 
GAACTGACTC GTCGTTACTA CGAGCAAGAT GACGAATCCG CGTTGCCACG CAACATCGCA 
ACTTATGATG CCTTCGAAAA TGCAATGGCA CTGGATATCG CCATGGGCGG CTCGACCAAC 
ACCATTTTGC ACCTATTGGC TGCAGCGCAA GAAGGTGAAG TGGATTTCGA TATGGAAGAT 
ATCGATCGCC TGTCTCGCCA AGTACCGCAC CTATGTAAAG TTGCACCATC TACTCAGAAA 
TATCATATGG AAGACGTACA CCGCGCTGGT GGCGTAATGG CGATTCTTGG TGAATTGGAT 
CGTGCTGGTC TACTGCACAA TGATGCTCGC ACCGTACTGG GTCTTTCAAT GAAAGAGCAG 
TTGGCAAAAT ACGACATCAT CCAAACTGAA GACGAAGAGG TACTTAAGTT CTACCGCGCA 
GGCCCTGCGG GTATTCGTAC CACCCAAGCG TTCTCGCAAG ATTGTCGTTG GGATCGCCTT 
GATGACGACC GTGCAGAAGG TTGTATTCGC GCGAAAGACA ACGCCTTCAG CCAAGAAGGT 
GGCCTAGCCG TTCTATCAGG CAACATCGCA TTGGATGGCT GTATCGTTAA GACAGCCGGT 
GTTGATGAAA GCATTCTTAA GTTCACTGGT CCGGCTGTGG TATTTGAAAG CCAAGAAGAT 
GCGGTGGAAG GCATCTTAGG AGGTAAAGTG AAAGCCGGTG ATGTGGTTGT TATCCGTTAT 
GAAGGTCCAA AAGGTGGCCC AGGCATGCAA GAAATGCTTT ACCCAACCAC TTACCTAAAA 
TCGATGGGCC TTGGTAAAGA ATGTGCACTG CTGACTGACG GTCGTTTCTC TGGTGGTACA 
TCAGGACTCT CTATCGGCCA TGCTTCTCCT GAAGCCGCTA ACGGCGGTGC TATTGGACTG 
GTGAAACCGG GCGATATGAT CGCGATTGAT ATTCCGAACC GTTCAATTTC ACTCGAAGTG 
TCTGAACAAG AACTTGCAGA GCGCCGTGCA AAACAAGATG AACTTGGCTG GAAACCTGTT 
GATCGTCAAA GAGAAGTTTC CTTTGCACTT AAAGCGTACG CGAGCATGGC CACCAGTGCT 
GACAAGGGTG CAGTACGAGA CAAGTCGAAG CTAGAGGGCT AG 

 

Protein sequence

MPKYRSATTT HGRNMAGARA LWRATGVKEE DFGKPIIAVV NSFTQFVPGH VHLKDMGQLV 
AREIEKAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MASMRLNIPV IFVSGGPMEA GKTKLSDQII KLDLVDAMIQ GADPKVSDEQ 
SEQIERSACP TCGSCSGMFT ANSMNCLTEA LGLSQPGNGS MLATHADREQ LFLNAGRRIV 
ELTRRYYEQD DESALPRNIA TYDAFENAMA LDIAMGGSTN TILHLLAAAQ EGEVDFDMED 
IDRLSRQVPH LCKVAPSTQK YHMEDVHRAG GVMAILGELD RAGLLHNDAR TVLGLSMKEQ 
LAKYDIIQTE DEEVLKFYRA GPAGIRTTQA FSQDCRWDRL DDDRAEGCIR AKDNAFSQEG 
GLAVLSGNIA LDGCIVKTAG VDESILKFTG PAVVFESQED AVEGILGGKV KAGDVVVIRY 
EGPKGGPGMQ EMLYPTTYLK SMGLGKECAL LTDGRFSGGT SGLSIGHASP EAANGGAIGL 
VKPGDMIAID IPNRSISLEV SEQELAERRA KQDELGWKPV DRQREVSFAL KAYASMATSA 
DKGAVRDKSK LEG