Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002000 |
Symbol | |
ID | 8555640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 406401 |
End bp | 408467 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405004 |
Product | glycyl-tRNA synthetase beta chain |
Protein accession | YP_003284628 |
Protein GI | 262392774 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG AATTTCTAAT CGAGCTAGGT ACAGAAGAGC TACCACCAAC GCAACTTCGT ACGCTAGCTG AAGCATTCGC AGCAAACTTC GAAGCAGAAC TAAAAAGCGC TGAGCTTGCT CACGAAGGCG TGAAATGGTT TGCGGCTCCT CGTCGTCTTG CACTTAAAGT CGCGGCACTA GCAGAAAGCC AATCAGACAA AATCGTTGAA AAACGTGGCC CTGCGGTTTC TGCAGCGTTT GACGCGGAAG GCAACCCAAC CAAAGCGGCT CAAGGCTGGG CACGCGGTTG TGGTATTTCT GTTGACCAAG CAGAGCGCAT GGTTACAGAT AAAGGTGAAT GGCTACTGTT CAAACAAGAA GTGAAAGGTC AGCCAACGTC TGAGATCGTT GTTGAACTTG CAGCGAAAGC ACTAGCAAAC CTACCTATCG CAAAACCAAT GCGCTGGGGT AACAAAACAA CTCAGTTCAT CCGTCCAGTT AAGACGCTAA CCATGCTGAT GGGCAGCGAC CTAATCGAAG GCGAGATCCT TGGTGTCGCT TCTGACCGCA CTATCCGTGG TCACCGCTTC ATGGGTGAAC AAGAGTTCAC TATCGATTCT GCTGAGCAAT ACCCTGCGAT CCTAGAAGAG CGCGGTAAAG TAATGGCAGA TTACGAAGCG CGTAAAGCAA TCATCCTAGC TGACGCACAA AAAGCGGCAG CAGCGGTTGG CGGTATCGCT GACCTAGAAG ATGACCTAGT AGAAGAAGTC ACGTCTCTGG TTGAATGGCC AGTAGTACTT ACAGCGAAGT TCGAAGAAGA GTTCCTAAAA GTGCCTTCTG AAGCGTTGGT TTACACCATG AAAGGTGACC AGAAGTACTT CCCTGTTTAT GACGAAAACA AGAAACTACT ACCTAACTTC ATCTTCGTAT CGAACATCGA ATCAAAAGAA CCTCGTTACG TAATCGAAGG TAACGAGAAA GTGGTTCGTC CTCGTCTTGC TGACGCAGAG TTCTTCTTCA ACACAGACCG TAAGCGTCCG CTTATCGACC GTCTGCCTGA ACTAGAGCAA GCGATCTTCC AAAAGCAACT GGGTACGATC AAAGACAAAA CAGACCGCAT CACAGAACTT GCTGGCTACA TTGCAGAGCA AATCGGTGCT GACGTTGAGA AATCAAAGCG TGCTGGTCTA CTAGCAAAAT GTGATCTAAT GACCTCAATG GTATTCGAAT TCACGGATAC TCAAGGTGTT ATGGGTATGC ACTACGCTCG CCACGACGGT GAAGCAGAAG AAGTTGCAGT AGCACTGAAT GAGCAATACA TGCCTCGTTT CGCAGGTGAT GAACTGCCAT CAAACGGCGT TTCAACAGCA GTTGCAATGG CAGACAAGCT AGACACTATC GTAGGTATCT TCGGTATTGG TCAAGCGCCT AAAGGCAGCG ATCCATTCGC ACTACGCCGC GCATCTCTAG GTGTACTACG TATCATCGTT GAATACGGCT ACAACCTAGA TCTTGTTGAC CTAGTAGCGA AAGCGAAGTC ACTGTTTGTC GACCGCCTAA CCAACGACAA CGTTGAACAA GACGTTATCG AGTTCATGCT TGGTCGTTTC CGTGCTTGGT ACCAAGACGA AGGCTTCAGC GTAGACATCA TTCAAGCAGT TCTAGCGCGT CGCCCGACGA AACCAGCAGA CTTCGACCAA CGAGTTAAAG CGGTTTCTCA CTTCCGTGAA CTAGAAGCAG CAGAGTCTCT AGCAGCAGCG AACAAACGTG TAGGTAACAT CCTAGCGAAA TTCGACGGCG AATTAGCAGC AGACATCGAC CTAGCACTTC TACAAGAAGA CGCAGAGAAA GCACTAGCAG AAAGCGTTGA AGTAATGACG GAAGCACTAG AGCCTGCATT TGCGACCGGT AACTACCAAG AAGCCCTAAG CAAGCTAGCA GATCTACGTG AGCCAGTGGA TGCGTTCTTC GATAACGTAA TGGTAATGGC AGACGACGAA GCACTTAAGA AGAACCGTCT GACATTGCTG AACAACCTGC GTAACCTGTT CTTACAGGTC GCAGATATCT CTGTCCTTCA AAAGTAA
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Protein sequence | MAKEFLIELG TEELPPTQLR TLAEAFAANF EAELKSAELA HEGVKWFAAP RRLALKVAAL AESQSDKIVE KRGPAVSAAF DAEGNPTKAA QGWARGCGIS VDQAERMVTD KGEWLLFKQE VKGQPTSEIV VELAAKALAN LPIAKPMRWG NKTTQFIRPV KTLTMLMGSD LIEGEILGVA SDRTIRGHRF MGEQEFTIDS AEQYPAILEE RGKVMADYEA RKAIILADAQ KAAAAVGGIA DLEDDLVEEV TSLVEWPVVL TAKFEEEFLK VPSEALVYTM KGDQKYFPVY DENKKLLPNF IFVSNIESKE PRYVIEGNEK VVRPRLADAE FFFNTDRKRP LIDRLPELEQ AIFQKQLGTI KDKTDRITEL AGYIAEQIGA DVEKSKRAGL LAKCDLMTSM VFEFTDTQGV MGMHYARHDG EAEEVAVALN EQYMPRFAGD ELPSNGVSTA VAMADKLDTI VGIFGIGQAP KGSDPFALRR ASLGVLRIIV EYGYNLDLVD LVAKAKSLFV DRLTNDNVEQ DVIEFMLGRF RAWYQDEGFS VDIIQAVLAR RPTKPADFDQ RVKAVSHFRE LEAAESLAAA NKRVGNILAK FDGELAADID LALLQEDAEK ALAESVEVMT EALEPAFATG NYQEALSKLA DLREPVDAFF DNVMVMADDE ALKKNRLTLL NNLRNLFLQV ADISVLQK
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