| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001988 |
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| Symbol | |
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| ID | 8555628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 397572 |
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| End bp | 399743 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646404992 |
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| Product | fatty oxidation complex alpha subunit FadB |
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| Protein accession | YP_003284616 |
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| Protein GI | 262392762 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTACC AAGCCGAAAC CCTACAGGTA AAGGAAATAC AAGATGGTAT TGCAGAGCTA
AGCTTCTGCT CTCCAAAATC CGTCAACAAA CTCGACCTAG CGACATTGGA ATCGCTAGAT
AAAGCTCTTG ATGCGCTCAT TGCCCATCAA GGCCTCAAGG GGTTGTTGCT CACTTCAGAT
AAAGACGCAT TCATTGTAGG CGCAGACATT ACCGAGTTTT TAGGTCTGTT TGCTAAAACG
GATGCCGAGC TCGACCAATG GCTGCAATTT GCTAATAGCA TCTTTAACAA ATTAGAAGAC
TTACCCGTTC CGACCATCTC AGTGATCAAA GGCCACGCTC TTGGTGGCGG TTGTGAATGT
GTACTAGCAA CAGACATGCG TATTGGTGAC AAAACCACCA GCATCGGCCT ACCAGAAACG
AAACTGGGAA TCATGCCAGG CTTTGGTGGT TGTGTACGCT TACCTCGCGT TATTGGCGCA
GACAGCGCAA TGGAAATCAT CACCCAAGGT AAAGCATGCC GAGCTGATGA AGCATTGAAA
ATTGGCTTAC TCGATGCTGT TGTAGAGACT GATGCTTTAT ACGAATCGGC ACTACAAACG
CTGAACTCTG CAATTAACGA GAAACTTGAC TGGCAAGCAC GCCGAGCACA GAAAACATCT
CCGCTAACGC TGAGTAAGCT TGAATCAATG ATGAGCTTCA CCATGGCGAA GGGTCTGGTG
GCACAAAAAG CAGGTCCTCA TTACCCTGCC CCAATGACAG CCGTTATCAC GATTGAAGAA
GGTGCTCGCT TTGCACGTAA TGAAGCGTTA GACATTGAAC GTAAGCACTT CGTGAAATTG
GCTAAATCGG AAGAAGCAAA ATCACTGGTT GGCCTATTCC TTAATGATCA ATACATCAAA
GGCATTGCGA AAAAAGCAGC GAAGTCAGCA AGTAAAGACA CGCAACGTGC AGCCGTATTA
GGTGCAGGTA TCATGGGTGG CGGCATTGCT TACCAATCAG CGCTAAAAGG TGTGCCAGTC
TTGATGAAAG ACATCGCACA AGCGTCGCTC GACCTAGGCA TGACTGAAGC ATCTAAGCTG
CTGAATAAAC GCTTATCTCG CGGTCGCATT GACGGCTTTA AGATGGCAGG TATTTTAGCG
TCAATCACAC CGAGCCTACA TTACGCAGGT ATTGAAAACT CTGATGTGAT TGTTGAAGCT
GTCGTTGAAA ACCCGAAAGT AAAAGCAGCA GTTTTGAGTG AAGTTGAGTC CCATGTCGGT
GACGACACCG TTATCACCTC AAACACCTCG ACGATTCCTA TCAACCTATT GGCAAAATCA
CTAAAACGCC CAGAAAACTT CTGTGGTATG CACTTCTTCA ACCCAGTGCA TCGTATGCCT
CTTGTTGAGA TCATCCGTGG TGAGCACACC TCTGATGAAA CCATCAATCG TGTTGTGGCG
TATGCTGCGA AAATGGGCAA ATCACCAATT GTCGTTAATG ACTGCCCGGG GTTCTTCGTT
AACCGCGTAT TGTTCCCATA CTTTGGCGGC TTCAGCATGC TACTTCGTGA TGGTGCTGAC
TTTACGAAAA TCGACAAAGT CATGGAGCGT AAGTTTGGCT GGCCGATGGG ACCGGCGTAC
TTGCTTGATG TAGTCGGCAT TGATACCGCG CACCACGCAC AAGCTGTGAT GGCAGAGGGT
TTCCCTGAGC GTATGGGTAA ACAAGGTCGT GATGCGATTG ATGCACTATT CGAAGCAGAC
AAATATGGTC AGAAAAATGG TAATGGCTTC TACAGCTACA CCATAGATAA AAAAGGTAAG
CCGAAGAAAA CCTTCTCAGA AGCGATCTTA CCAGTACTTG CCGACGTTTG TGCTGATAAG
CATGACTTTG ACGATGAGAC CATCATTCAA CGTATGATGA TTCCAATGAT CAACGAAGTT
GTGCTGTGCC TTCAAGAAGG CATCATCGCT ACTCCGCAGG AAGCAGACAT GGCATTGGTT
TATGGTCTTG GTTTCCCTCC ATTCCGCGGT GGCGTATTCC GCTATCTAGA CAGCGTGGGT
ATTGCTGAAT ACGTTGAAAT GGCAAAACAA CACGCCGAGC TAGGTGCGAT GTACCAAGTA
CCGCAAATGC TGATTGATAT GGCGGCGAAA GGAGAAAGCT TTTACGGTGC ACAACAGCAA
GGTTCTATCT AA
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| Protein sequence | MIYQAETLQV KEIQDGIAEL SFCSPKSVNK LDLATLESLD KALDALIAHQ GLKGLLLTSD
KDAFIVGADI TEFLGLFAKT DAELDQWLQF ANSIFNKLED LPVPTISVIK GHALGGGCEC
VLATDMRIGD KTTSIGLPET KLGIMPGFGG CVRLPRVIGA DSAMEIITQG KACRADEALK
IGLLDAVVET DALYESALQT LNSAINEKLD WQARRAQKTS PLTLSKLESM MSFTMAKGLV
AQKAGPHYPA PMTAVITIEE GARFARNEAL DIERKHFVKL AKSEEAKSLV GLFLNDQYIK
GIAKKAAKSA SKDTQRAAVL GAGIMGGGIA YQSALKGVPV LMKDIAQASL DLGMTEASKL
LNKRLSRGRI DGFKMAGILA SITPSLHYAG IENSDVIVEA VVENPKVKAA VLSEVESHVG
DDTVITSNTS TIPINLLAKS LKRPENFCGM HFFNPVHRMP LVEIIRGEHT SDETINRVVA
YAAKMGKSPI VVNDCPGFFV NRVLFPYFGG FSMLLRDGAD FTKIDKVMER KFGWPMGPAY
LLDVVGIDTA HHAQAVMAEG FPERMGKQGR DAIDALFEAD KYGQKNGNGF YSYTIDKKGK
PKKTFSEAIL PVLADVCADK HDFDDETIIQ RMMIPMINEV VLCLQEGIIA TPQEADMALV
YGLGFPPFRG GVFRYLDSVG IAEYVEMAKQ HAELGAMYQV PQMLIDMAAK GESFYGAQQQ
GSI
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