Gene VEA_001987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001987 
Symbol 
ID8555627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp396687 
End bp397310 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content47% 
IMG OID646404991 
Producthypothetical protein 
Protein accessionYP_003284615 
Protein GI262392761 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.130399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACA AGCCTTATCT GATTCCAGCA GAGCCCGCTC AATTTGAAGA AGAAATTAAA 
AAGAGCGTCT TCATTACTTA TTTGGCACAC ACGCCAAGTA TCGAAGCAGC AAAAGCATTT 
GTTGATCAAA TCAAAGCTAA ACACGCTGAT GCCAGACATA ACTGTTGGGG CTTTGTTGCT 
GGCCACCCGG AAGATTCAAT GAAATGGGGC TTTAGTGATG ATGGGGAGCC ATCCGGAACT 
GCAGGCAAAC CGATCCTTGC TCAGCTGTCT GGATCTGGTG TGGGGGAGAT CACGGCTGTG 
GTCACGCGAT ACTCTGGTGG AATCAAGTTA GGTACAGGCG GCTTGGTTAA AGCGTATGGG 
GGTGGGGTAC AACAAGCGCT CAAGCTGCTT CAAACTATTG AGAAAAAAAT AACCACAAAG 
CTCAGACTAA CGTTAGACTA TGGGTTTATG CCGATCGCAC AGTCAATCAT GCCGCAATTT 
GGTGCGATAG AAGTCGAGGC TGAATACAGC GATCAGGTCG TATTAGTGGT GGAAATTGAG 
CTTCGAGAAG TGAGCGCGTT TACCCAAGCA ATCATCAATA AAAGCGGGGC AAAGGCAATT 
GTCACTCCGC TAGACGGACA ATAA
 
Protein sequence
MNDKPYLIPA EPAQFEEEIK KSVFITYLAH TPSIEAAKAF VDQIKAKHAD ARHNCWGFVA 
GHPEDSMKWG FSDDGEPSGT AGKPILAQLS GSGVGEITAV VTRYSGGIKL GTGGLVKAYG 
GGVQQALKLL QTIEKKITTK LRLTLDYGFM PIAQSIMPQF GAIEVEAEYS DQVVLVVEIE 
LREVSAFTQA IINKSGAKAI VTPLDGQ