Gene VEA_001952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001952 
Symbol 
ID8555581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp345475 
End bp347517 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content50% 
IMG OID646404945 
Productoligopeptidase A 
Protein accessionYP_003284580 
Protein GI262392726 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATC CTCTTCTGAC GTTTACGGAC TTACCTCCGT TTTCTCAAAT TAAACCAGAA 
CACATCAAGC CTGCTGTTGA ACAAGCGATT GCTGACTGCC GAGCGAAAAT CGATGAAGTT
CTAAAAGATA ATGCTCACCC AACTTGGGAC AGTGTGATTG CGCCAATTGA AGAAGCGGAT
GACCGCTTAA GCCGCATTTG GTCGCCAGTG GGTCACATGA ACTCCGTGGT GAACAGCGAA
GATCTGCGTG AGGCGTACGA AAGTTGTTTG CCAATTTTGT CAGAGTACGG AACTTGGGTT
GGTCAGCACA AAGGCCTGTA CGAAGCGTAC AAAGCGATTA AAGCCAGTGA TGCATTCGCA
ACGCTGACTC GCGCTCAACA AAAAACCATC ACCGATGCGT TACGAGACTT TGAGCTATCG
GGTATTGGTT TACCATCCGA TGAGCAGCAC CGTTACGGCG AAATCAGCAA GCGCATGTCT
GAGCTCAGCT CTAAATTCTC TAACAATGTA CTGGATGCCA CCATGGGTTG GACCAAGCAC
ATCACGGATG AGAAAGACCT TGCTGGCATG CCAGAATCGG CGCTGGCAGC AGCGAAAGCC
GCGGCAGAAG CAAAAGAGTT AGATGGTTAC CTCATTACGC TGGATATCCC ATCTTACCTA
CCTGTCATGA CGTACTGCGA CAACCAAGAG TTGCGTAAAG AAGTGTACGA AGCGTATGTG
ACGCGCGCCT CTGATCGCGG TCCAAATGCT GGTAAGTGGG ACAACTCAGA AATCATTACT
GAGCAACTGA GACTGCGTCA CGAAATTTCA CGCATGTTGG GTTTCAATAC TTACAGCGAG
AAATCGTTAG CAACGAAAAT GGCCGAAACG CCAGATCAAG TGTTGGGCTT CTTGAATGAC
CTAGCGACAC GTGCGAAACC GCAAGGTGAA CGTGAAGTCG AAGAGTTGCG TCAGTTTGCG
AAAAGTGAGT TTGGCGTTGA AGAATTGAAT GTGTGGGATA TCGCTTACTA TAGCGAGAAA
CAAAAGCAGC ACTTGTTCCA AATCTCGGAT GAAGAACTGC GCCCGTACTT CCCAGAGTCA
AAGGTTGTCA GTGGTCTGTT TGAAGTGCTA AACCGCGTGT TTGGCATGAC AGTTACTGAG
CGCGAAGGCG TGGACACTTG GCACGAATCT GTGCGTTTCT TCGATATCTT TGACGCTGAA
GGCGCACTGC GTGGCAGTTT CTACTTAGAT CTCTACGCAC GTGAGCACAA ACGTGGTGGC
GCGTGGATGG ATGACTGTCG TGGTCGTCGT ATTACGCTCT CTGGCGAACT GCAAACGCCG
GTGGCGTACC TAACGTGTAA CTTCAACCGT CCAGTGGGCG ACAAGCCAGC ACTGTTTACG
CACGATGAAG TTGTGACACT TTTCCATGAA TTTGGTCACG GTATCCACCA CATGCTGACG
CAAGTAGAAA CTGGCGCGGT ATCAGGGATT AATGGCGTAC CTTGGGATGC GGTTGAGCTA
CCAAGTCAGT TCCTAGAAAA CTGGTGTTGG GAAGAAGACG CACTGGCGTT CATTTCTGGT
CATTATGAGA CAGGCGAGCC GTTGCCAAAA GCGATGCTAG ATAAGATGCT CGCGGCGAAG
AACTTCCAGT CGGCGATGGG CATTTTGCGT CAGCTAGAAT TCGGTTTGTT CGACTTTACT
CTGCACACCG AATACGACCC AGAAGTGGGC GCGCGTGTGC TGGAAACGCT AGCGAAAGTG
AAAGAGAAAG TCGCGGTGGT TCCAGCCGTT GAGTGGGCGC GCTTCTCGCA CAGCTTTGGT
CACATCTTCG CTGGTGGTTA CAGCGCGGGT TACTACAGCT ATCTGTGGGC GGAAGTGCTG
TCGTCAGACG CGTATTCTCG CTTTGAAGAA GAAGGTATCT TCAACAAAGA AACGGGTCAA
AGCTTCCTGA ACAACATCTT AGAAATGGGT GGCAGTGAAG AGCCAATGGA GCTGTTTAAG
CGCTTCCGTG GTCGTGAACC ACAAATTGAT GCGCTATTGC GCCATTCTGG TATTGCAGCG
TAA
 
Protein sequence
MSNPLLTFTD LPPFSQIKPE HIKPAVEQAI ADCRAKIDEV LKDNAHPTWD SVIAPIEEAD 
DRLSRIWSPV GHMNSVVNSE DLREAYESCL PILSEYGTWV GQHKGLYEAY KAIKASDAFA
TLTRAQQKTI TDALRDFELS GIGLPSDEQH RYGEISKRMS ELSSKFSNNV LDATMGWTKH
ITDEKDLAGM PESALAAAKA AAEAKELDGY LITLDIPSYL PVMTYCDNQE LRKEVYEAYV
TRASDRGPNA GKWDNSEIIT EQLRLRHEIS RMLGFNTYSE KSLATKMAET PDQVLGFLND
LATRAKPQGE REVEELRQFA KSEFGVEELN VWDIAYYSEK QKQHLFQISD EELRPYFPES
KVVSGLFEVL NRVFGMTVTE REGVDTWHES VRFFDIFDAE GALRGSFYLD LYAREHKRGG
AWMDDCRGRR ITLSGELQTP VAYLTCNFNR PVGDKPALFT HDEVVTLFHE FGHGIHHMLT
QVETGAVSGI NGVPWDAVEL PSQFLENWCW EEDALAFISG HYETGEPLPK AMLDKMLAAK
NFQSAMGILR QLEFGLFDFT LHTEYDPEVG ARVLETLAKV KEKVAVVPAV EWARFSHSFG
HIFAGGYSAG YYSYLWAEVL SSDAYSRFEE EGIFNKETGQ SFLNNILEMG GSEEPMELFK
RFRGREPQID ALLRHSGIAA