Gene VEA_001925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001925 
Symbol 
ID8555554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp318614 
End bp320248 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content48% 
IMG OID646404918 
Productubiquinone biosynthesis monooxygenase UbiB 
Protein accessionYP_003284553 
Protein GI262392699 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCAG CAGAACTAAA GCGCTTATAC CACATCGCCA AAGTACAACT GGAATACGGC 
TTAGATGAGC TGCTTCCCGA TCACCAACTG ACCAAAGCTC CGTTATTACT GCGCAAAAGC
CTGTTCTGGA TTAAGAACAA GCATCCAGAA AAACCGCTCG GTGAGCGCCT GCGTTTAGCG
TTGCAAGAGC TGGGACCAGT TTGGATTAAG TTCGGTCAGA TGATGTCAAC GCGCCGTGAC
TTATTTCCTC CGCACATTGC TGATCCCCTG GCTTTGCTTC AAGACCAAGT GGCGCCATTT
GATGGTGAGC TAGCAAAAAA GCAGATGGAG CAGGCATTAG GTGGCCCGTT AGAAAACTGG
TTTACCGAGT TTGATATCAA ACCACTGGCG TCTGCGTCGA TTGCTCAGGT GCATACTGCG
CGTTTAAAAG ACTCTAACCA AGAAGTGGTA TTAAAGGTTA TCCGCCCAGA TATTCGCCCG
GTCATTGATT CAGATCTAAA ACTGATGCAC CGAATGGCGC GTATAGTCGC CGGAGCGATG
CCTGAAGCAC GTCGTTTGAA ACCGGTTGAA GTTGTACGTG AGTACGAGAA AACATTGCTT
GATGAACTCG ACTTACGACG TGAAGCGGCG AATGCCATTC AGTTGCGCCG CAACTTTGAA
GGCAGCGAAG AATTGTATGT TCCTGAAGTT TTTCCTGACT TCAGTAATGA AACTGTCATG
GTTTCTGAGC GAATATATGG CATTCAAGTC TCTGATATTG ATGGCTTGAA AGCAAATGGC
ACCAATATGA AATTGCTCGC GGAGCGCGGC GTGAGTGTGT TCTTCACTCA AGTGTTCCGA
GACAGCTTCT TCCATGCCGA TATGCATCCG GGGAACGTGT TCGTCAAACC CGAACATCCA
GAGAACCCAA TGTGGATCGG GCTAGATTGC GGAATCGTTG GTACACTTAA TAGTGAAGAC
AAGCGTTATC TGGCGGAAAA CTTCCTGGCG TTTTTCAATC GAGACTATCG CCGAGTGGCG
GAGTTACATG TGGACTCAGG ATGGGTGCCT GCCGATACCA ATGTCGATGA GTTTGAGTTC
GCGATTCGCA TTGTGTGTGA GCCTATTTTT GCTAAGCCAC TGTGCGAAAT CTCCTTTGGT
CATGTGTTGT TGAATTTGTT CAACACGGCA CGTCGATTCA ACATGGAGGT TCAGCCACAA
CTTGTATTGC TGCAAAAAAC GCTGCTGTAC GTGGAAGGTC TTGGTAGGCA GCTGTACCCT
CAGCTTGATT TGTGGGAGAC CGCAAAACCA TTCCTTGAAG AATGGATGAT GAATCAAGTT
GGGCCGCAAG CTTTGGTGAA TGCGATTAAA GATCGCGCGC CATTTTGGGC GGAGAAGTTA
CCGGAACTGC CAGAGCTGCT TTACGATAGC CTGAAACAAG GTAAAGCGAT GAACCAACGC
ATGGATCAAC TTTACCAAGG GTATCGTCAG AGCAAGCGTC AGCAGGCGAC AGGAAAGTTT
TTATTTGGCG TTGGCGCCAC TTTAGTCGTA TGCTCGGCAA TATTGGTGAA CAATGCTTTT
GAGCAGCTTT CGTTGGCCAG CGGTATCGCA GGTGTCACAT TTTGGCTGCT TAGTTGGCGA
GCTTATCGTC AATAG
 
Protein sequence
MTPAELKRLY HIAKVQLEYG LDELLPDHQL TKAPLLLRKS LFWIKNKHPE KPLGERLRLA 
LQELGPVWIK FGQMMSTRRD LFPPHIADPL ALLQDQVAPF DGELAKKQME QALGGPLENW
FTEFDIKPLA SASIAQVHTA RLKDSNQEVV LKVIRPDIRP VIDSDLKLMH RMARIVAGAM
PEARRLKPVE VVREYEKTLL DELDLRREAA NAIQLRRNFE GSEELYVPEV FPDFSNETVM
VSERIYGIQV SDIDGLKANG TNMKLLAERG VSVFFTQVFR DSFFHADMHP GNVFVKPEHP
ENPMWIGLDC GIVGTLNSED KRYLAENFLA FFNRDYRRVA ELHVDSGWVP ADTNVDEFEF
AIRIVCEPIF AKPLCEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP
QLDLWETAKP FLEEWMMNQV GPQALVNAIK DRAPFWAEKL PELPELLYDS LKQGKAMNQR
MDQLYQGYRQ SKRQQATGKF LFGVGATLVV CSAILVNNAF EQLSLASGIA GVTFWLLSWR
AYRQ