| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001890 |
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| Symbol | |
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| ID | 8555519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 278122 |
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| End bp | 279339 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646404883 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_003284518 |
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| Protein GI | 262392664 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAT TTGAGTACAA AGCGCTAGAT GCAAAAGGCA AGCATAAAAA AGGCACGATA
GAAGGGGACA ACGCCCGACA AGTGCGCCAG CGACTCAAAG AGCAAGGGAT GATCCCGATT
GAAGTGGTCG AGACGAAAGC TAAATCGGCT AAGTCTTCAG GTTCAGTCAG CTTTAAGCGC
GGCATCTCAA CATCTGAGCT GGCACTAATC ACACGTCAAT TGTCCACGTT AGTCCAATCA
GGTATGCCTT TGGAAGAATG TTTGCGTGCT GTCTCTGAGC AGGCTGAAAA GCCGAGAATT
CGTTCTATGC TGGCTGCGGT TCGCTCGAAA GTAACCGAGG GTTATCCGCT CGCCGACAGT
TTTGCTGATT ACCCACACGT GTTTGATGAA CTCTATCGCT CCATGGTTGC GGCGGGTGAA
AAGTCAGGCC ATCTTGATAC GGTATTAGAG CGTTTGGCGG ACTACGTCGA AAACCGTCAG
AAGATGCGTT CCAAACTGCT TCAAGCCATG ATCTACCCGG TGGTTTTGGT GGTGTTTGCG
GTTGTTATTG TTTCTTTCTT ATTAGCGACA GTGGTACCCA AAATTATTGA GCCAATCATT
CAGATGGGAC AAGAGTTACC TCAGTCAACG CAGTTCTTAC TGGCAGCCAG TGAGTTTGTG
CAAGATTGGG GGCTTATCAT CTTCGTCGTG CTGGTGGTGT TTTTCTATGT GCTCAAACTG
GCGTTGCAAA AACCAGACTT TCGCTTAGCT TGGGATAGAA AAATCTTGAG CCTACCGCTA
TTAGGCAAAA TCTCTCGAGG TTTGAATACC GCACGATTCG CACGAACACT TTCGATTTGT
ACTTCCAGTG CGATTCCAAT TCTAGAAGGC ATGCGCGTTG CGGTGGATGT TATGTCTAAT
CGCTATGTGA AGCAGCAAGT ATTGCTTGCT GCGGATAACG TTCGAGAAGG TGCCAGCCTG
CGTAAGGCGT TGGATCAAAC TCGTCTGTTT CCACCAATGA TGCTACACAT GATCGCCAGT
GGTGAGCAAA GTGGTGAATT GGAGAGCATG TTGACGCGTG CTGCCGATAA CCAAGATCAA
AACTTTGAAT CTACAGTCAA TATTGCGCTA GGTGTATTCA CTCCGGCATT AATTGCCTTA
ATGGCTGGAT TAGTGTTGTT TATTGTGATG GCGACCTTGA TGCCAATGCT AGAAATGAAT
AACTTGATGA GCGGATAA
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| Protein sequence | MAAFEYKALD AKGKHKKGTI EGDNARQVRQ RLKEQGMIPI EVVETKAKSA KSSGSVSFKR
GISTSELALI TRQLSTLVQS GMPLEECLRA VSEQAEKPRI RSMLAAVRSK VTEGYPLADS
FADYPHVFDE LYRSMVAAGE KSGHLDTVLE RLADYVENRQ KMRSKLLQAM IYPVVLVVFA
VVIVSFLLAT VVPKIIEPII QMGQELPQST QFLLAASEFV QDWGLIIFVV LVVFFYVLKL
ALQKPDFRLA WDRKILSLPL LGKISRGLNT ARFARTLSIC TSSAIPILEG MRVAVDVMSN
RYVKQQVLLA ADNVREGASL RKALDQTRLF PPMMLHMIAS GEQSGELESM LTRAADNQDQ
NFESTVNIAL GVFTPALIAL MAGLVLFIVM ATLMPMLEMN NLMSG
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