| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001827 |
|---|
| Symbol | |
|---|
| ID | 8555456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 215900 |
|---|
| End bp | 216616 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646404820 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_003284455 |
|---|
| Protein GI | 262392601 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0308379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAA ACGATCGCAA GGCGGATCAA GTTCGCCCTA TCAAAATTAC TCGTAACTAC
ACAGCTTACG CTGAAGGGTC AGTGCTAGTT GAGTTCGGTA ACACCAAAGT GTTGTGTAAT
GCGACCGTCG AAGAATCTGT GCCACGTTGG TTAAAAGGTC AAGGTAAAGG CTGGGTTACA
GCTGAATACG GCATGCTACC TCGAGCAACA CATTCTCGTA CTCGTCGTGA AGCGGCAAGT
GGCAAACAAG GCGGCCGTAC GATGGAAATT CAGCGTCTTA TTGCACGAAG CCTACGTGCT
GTTGTCGATC TAAAAGCCAT GGGTGAGTTC ATGATCACCG TTGACTGTGA CGTTATCCAA
GCTGACGGTG GTACCCGTAC TGCATCTATC AGCGGCGCAA GTGTTGCAAT GGCCGATGCG
TTCCAACACC TAGTGGATAG CGGTAAGCTA AAAGCGAATC CAATGAAAGG CCACGTAGCG
GCAGTTTCAG TTGGTTTGCT AGGCGATGAT GTTCTGTGTG ACCTTGAGTA CGTTGAAGAT
TCAGCGGCAG ACACAGACAT GAACGTGGTA ATGACCGAAG AAGGCAAGAT GATTGAAATT
CAGGGCACTG CAGAAGGTGA ACCGTTCAGT CACGAACAGC TGATGGCATT GCTCGAGTCG
GCGAAAATCG GCATTACGGA AATTGTCGCA GCGCAGAAGG CGGCGTTAGC CAATTGA
|
|---|
| Protein sequence | MRPNDRKADQ VRPIKITRNY TAYAEGSVLV EFGNTKVLCN ATVEESVPRW LKGQGKGWVT
AEYGMLPRAT HSRTRREAAS GKQGGRTMEI QRLIARSLRA VVDLKAMGEF MITVDCDVIQ
ADGGTRTASI SGASVAMADA FQHLVDSGKL KANPMKGHVA AVSVGLLGDD VLCDLEYVED
SAADTDMNVV MTEEGKMIEI QGTAEGEPFS HEQLMALLES AKIGITEIVA AQKAALAN
|
|---|
| |