| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001817 |
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| Symbol | |
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| ID | 8555446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 207108 |
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| End bp | 207917 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646404810 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_003284445 |
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| Protein GI | 262392591 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000220306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGT TGCCAGAAGT TGAAGTCAGT CGTATGGGGA TTAGCCCCCA CATGGTTGGA
CAAACGATCC AGTCGTTTAC TTTTCGAACG CCTAAATTGC GCTGGGATAT TCCTATAGAG
CTTAAAAAAT TGGAAGGGCA GGTGATCCGT GCGATTAGCC GTCGCGCAAA ATACTTACTG
ATCGAGACAA ACACAGGTAC AGCCATTGTT CACTTGGGCA TGTCGGGGTC TTTACGTGTC
CTAGATGCCG ACTTTCCGCC AGCAAAGCAC GATCATGTGG ATCTCAAACT AAGCAGTGGA
AAAATACTGC GTTATAACGA TCCGCGTCGT TTTGGGGCAT GGCTGTGGTG TGCTCCTGGC
GAGTCACATG CTGTACTAGC AAACATGGGG CCTGAGCCTT TAACTGAAGA GTTCAATGCG
GAATATGTAG CGGAGAAAGC TAAAAATAAG CGTGTCGCCG TCAAGCAGTT CATCATGGAC
AACAAAGTCG TGGTTGGTGT CGGGAACATC TACGCGAATG AGTCGTTGTT TAAATCTCGA
ATTCACCCTT CAAGGCCTGC AGGTAAGCTG ACTTCTCAAG AGTGGGGGGG ACTTGTTGAA
AATATCAAAA TGACACTTGA GATTGCCATT ACGCAAGGTG GGACTACGCT GAAAGATTTT
GCGCAAGCCG ATGGAAAGCC GGGTTACTTT GCACAAGAGT TACTAGTTTA CGGAAAAGCC
GGAGAGCCAT GCCCAGAGTG CGGCGAACGA CTTCAAGAGC TAAAAATAGG GCAGCGTAAT
ACCTTCTTTT GTAGTGAGTG TCAGAAATAA
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| Protein sequence | MPELPEVEVS RMGISPHMVG QTIQSFTFRT PKLRWDIPIE LKKLEGQVIR AISRRAKYLL
IETNTGTAIV HLGMSGSLRV LDADFPPAKH DHVDLKLSSG KILRYNDPRR FGAWLWCAPG
ESHAVLANMG PEPLTEEFNA EYVAEKAKNK RVAVKQFIMD NKVVVGVGNI YANESLFKSR
IHPSRPAGKL TSQEWGGLVE NIKMTLEIAI TQGGTTLKDF AQADGKPGYF AQELLVYGKA
GEPCPECGER LQELKIGQRN TFFCSECQK
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