| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001774 |
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| Symbol | |
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| ID | 8555403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 161365 |
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| End bp | 162690 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646404767 |
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| Product | metallo-beta-lactamase family protein RNA-specific |
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| Protein accession | YP_003284402 |
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| Protein GI | 262392548 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.122303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC TTCATCATGG TGGGAAGGAT ACGGTGACGG GCTCTTGTCA CGAACTGCGA
CTTGAGCAAG GGAGCATTTT GATCGACTGC GGGTTATTTC AAGGTAAAGA TGCATTGGTA
GGTCGTAATG ATCGTTCGCT GGCTATAGAG TTTCCTTTAA CCAAGGTAAA AGCGCTGGTA
CTGACCCATG CTCATATTGA CCATATAGGC CGATTACCAT GGTTACTCGC TGCTGGTTTT
AAAGGCAAAA TCTACTGCAC ACAAGCAACT GCTGAATTGG TCCCTCTTAT GTTAGAGGAC
GGATTAAAGC TACAGCTGGG TTTAGGCAAA CATCAACGGC AACATATATT AAATCTAATT
AAGCAACGAT TGGTGCCATG TCAGTACAAT ACATGGCTTC CTCTTAAGGG GTTGGCTTAT
ATACGCTTTC AACCTGCGGG CCATATTTTA GGTTCTGCTT ATTTGGAATT TAAACTCTCA
AATAATGACG TAGTGGTATT TTCTGGTGAT CTCGGTCCCA GTGATACGCC TTTACTCCCA
GATCCGAAAC CTCCTGAAAA AGCAGACTAT TTGTTTATTG AGTCGACCTA TGGTGATAAG
CAACATGAAA GCGTGAAAAG TAAAAGTACT CGATTGCTCT CTATTATCGA ACATGCGCTG
GAAGATGGTG GTGTGATTGT TATTCCTGCT TTTAGTGTCG GTAGGACACA AGAACTGTTA
TTCGATATCG AACAGCTTCT GCACCAGGAG TCTTTACATG GTGCCCTACC AATTATTCTT
GATTCGCCTT TAGCACGAAA AGTGACAAAG ACTTATCGGC GCTTTAAAAA ACTTTGGGGT
AAAGAAGCAA AAAGGCGTTT GGAGCAACAT CGTCATCCTC TCGGGTTTGA ACAATGTATT
ACGATTGAGA CTCATGCTGA ACATATGAGA TTGGTGAATC GTCTGGCGAG CACTTCTGAA
CCGGCTATTG TGGTTGCTGC TTCTGGGATG TGCGAAGGTG GTCGAGTGGT GAATTACCTC
AATGCGTTGT TACCAGATAG TCGTAATGAT GTGCTGTTTG CTGGCTATCA AGCAGAAGGA
ACGCTAGGGA GAGAAATTCA AGAGGGTGCG AGTGAGGTTG ATATCGAAGG AAAGAAAATT
AAAGTGAAAG CTCAAATACA TACGATGTCT GGCTATTCTG CTCATGCAGA TCAATCCGAT
CTAATTCGCT TTGTAGAAGG AATTAATCCA CCACCGAAAG AAGTGCATTT AATTCATGGT
GAAAATAAAG TAAAAAGAGC CCTACAATCC AACTTAACAG AAAAAGGCTC CACCGTTGTT
AAATAA
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| Protein sequence | MKVLHHGGKD TVTGSCHELR LEQGSILIDC GLFQGKDALV GRNDRSLAIE FPLTKVKALV
LTHAHIDHIG RLPWLLAAGF KGKIYCTQAT AELVPLMLED GLKLQLGLGK HQRQHILNLI
KQRLVPCQYN TWLPLKGLAY IRFQPAGHIL GSAYLEFKLS NNDVVVFSGD LGPSDTPLLP
DPKPPEKADY LFIESTYGDK QHESVKSKST RLLSIIEHAL EDGGVIVIPA FSVGRTQELL
FDIEQLLHQE SLHGALPIIL DSPLARKVTK TYRRFKKLWG KEAKRRLEQH RHPLGFEQCI
TIETHAEHMR LVNRLASTSE PAIVVAASGM CEGGRVVNYL NALLPDSRND VLFAGYQAEG
TLGREIQEGA SEVDIEGKKI KVKAQIHTMS GYSAHADQSD LIRFVEGINP PPKEVHLIHG
ENKVKRALQS NLTEKGSTVV K
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