| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001745 |
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| Symbol | |
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| ID | 8555374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 130654 |
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| End bp | 132855 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646404738 |
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| Product | helicase PriA essential for oriC/DnaA-independent DNA replication |
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| Protein accession | YP_003284373 |
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| Protein GI | 262392519 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.579492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCAA CCATTGCTAG AGTGGCATTA CCCGTTCCGC TCGACAAACA ATTTGATTAC
GCCATTCCGG GGCACCTGTT TCCGATCATT GGTGGACGCG TTTCCGTACC TTTTGGACGC
CAAACCTTAG TCGGCATCGT CACCGCAATG GTGAACGACT CCGACTTTCC TAAAGATCAA
CTTAAGCCAA TCAAAGCGGT ATTAGACTCC CAACCGATAT GGCCAGAGAC GCTTTATTCT
CTGCTAAATT GGTGCAGCCA GTTCTATCAG TACCCTCTAG GTGACACTCT ACACAATGCA
ATGCCTGCCG CGCTGAGGAA AGGCAAACCG GCCGACTTTG CAACGCTACA AGAATGGCAA
CTGACAGAAG CAGGAAGAAA TAAGCTCATG CAGGGGCTTG GACGTGCAAT AAAACAACAG
CGTGCACTCC AAATGATGGT CAACGGCCCA ACCTCGCATC AAGAGCTCTT GGATCAAGAA
GTAAACTCAA CCATCTTAAA AAACCTCGAA GAAAAAGGTT GGGTCGAGCG CATCGAGAAA
AAGCCGGTTA TTACGAAATG GAGTCAAAAT GTAGAGTGTG CGGTAGAGAA ACCAAAGCTT
AACCACGAAC AAGCACTCGC GATTGCCAGC GTAAATAGCC AAACGGGCTT TGCTTGCTAT
TTATTAGAAG GGGTCACGGG ATCCGGTAAA ACCGAAGTTT ACTTAAACCT TATCAAGCCA
GTTCTAGAGC AAGGGAAACA GGCACTAGTT TTAGTACCTG AGATCGGTCT AACGCCCCAA
ACCATCAACC GCTTTAAACA TCGATTTAAT GTCCCGGTAG ATGTGATTCA TTCCGGTTTG
AATGAAACAG AGCGTTTGAA CGCCTGGTTA TCGGCTCGCG ATAAAGCCGC GGGGATCATC
ATTGGTACGC GCTCAGCCCT ACTGACACCT TTTGCTGACT TGGGGATTAT TATCGTTGAT
GAAGAGCATG ACTCCTCGTA TAAGCAACAA GACAGCTTGC GTTACCACGC TCGTGATGTT
GCAGTCATGC GTGCCCATAA AGAACAAGTG CCGATTGTCC TTGGCTCAGC GACGCCAGCG
TTAGAAACCC TACATAATGC ACTGTCTGGT AAATATCACC ATTTAACACT CACCCAACGA
GCTGGCTCTG CCGTGCCAAC CACCAATAAA GTGTTAGATG TAAAAGGTCA GTATTTAGAA
AGTGGCTTAT CCGCCCAGCT GATTGCCGAA ATGCGCAAAC ACTTAAAAGT GGGCAATCAG
GTTATGTTGT TTCTTAACCG CCGAGGTTTC TCGCCCGCTT TGATGTGCCA TGAATGCGGT
TGGATTGCGG AATGTAAACG CTGTGATGCG TACTATACGT TCCACCATTA CAGCAACGAA
ATACGCTGCC ATCACTGTGG TTCACAACAA CCTGTCATTC ATCAGTGTCA GGGGTGTGGT
TCAACTCAAC TGGTTACCGT CGGCGTAGGA ACGGAACAGC TCGAACAACA ATTGGCTCAG
TTGTTTCCAG AATACAAAGC CATTCGCATC GACAGAGACA GCACACGTCG CAAAGGTAGC
TTGGAAGATG CCCTTGAGTC GATTCGTAAA GGTGAATACC AAATACTGAT AGGCACTCAA
ATGCTGGCTA AGGGGCACCA CTTTCCAAAT GTAACGCTCG TTGCTCTTTT GGATGTTGAT
GGCTCTCTAT ATAGTAGTGA CTTCCGCGCT TCGGAGCGAT TAGCTCAGCT GTTTATTCAG
GTCGCAGGTC GTGCTGGCCG AGCAAGTAAA CCTGGCGAAG TGATCCTGCA AACTCACCAT
CCTGAGCACA GCTTGCTGCA AGCCCTACTT CAAAAAGACT ATCGTCACTT TGCCATGACA
GCTCTGGAAG AGCGTAAGCT CGCCCAGCTT CCGCCTTATA GTTTCTTGAC TCTGTTTAAA
GCAGAAGCAA ACCAAAGTGA AGTGGTTGAA GACTTCTTAC GTCAGGTTCG CTTTACCTTA
GAATCGCATC CTTTATTTGA CGACACTTGC ATGGTGCTGG GTCCAACACC ATCACCTCTC
GCCAAACGTG CAGGCAAATA CCGCTGGCAG CTGTTACTTC AAACCCAGCA TCGTTCATTG
ATGCAAAAGT TATTAACCAG TGCCAAACCT GCTATTGAGT TGTTGCCAAA TGCCAAGAAA
GTTCGCTGGA ATTTAGACAT AGAGCCACAA GATCTCAGCT AG
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| Protein sequence | MRPTIARVAL PVPLDKQFDY AIPGHLFPII GGRVSVPFGR QTLVGIVTAM VNDSDFPKDQ
LKPIKAVLDS QPIWPETLYS LLNWCSQFYQ YPLGDTLHNA MPAALRKGKP ADFATLQEWQ
LTEAGRNKLM QGLGRAIKQQ RALQMMVNGP TSHQELLDQE VNSTILKNLE EKGWVERIEK
KPVITKWSQN VECAVEKPKL NHEQALAIAS VNSQTGFACY LLEGVTGSGK TEVYLNLIKP
VLEQGKQALV LVPEIGLTPQ TINRFKHRFN VPVDVIHSGL NETERLNAWL SARDKAAGII
IGTRSALLTP FADLGIIIVD EEHDSSYKQQ DSLRYHARDV AVMRAHKEQV PIVLGSATPA
LETLHNALSG KYHHLTLTQR AGSAVPTTNK VLDVKGQYLE SGLSAQLIAE MRKHLKVGNQ
VMLFLNRRGF SPALMCHECG WIAECKRCDA YYTFHHYSNE IRCHHCGSQQ PVIHQCQGCG
STQLVTVGVG TEQLEQQLAQ LFPEYKAIRI DRDSTRRKGS LEDALESIRK GEYQILIGTQ
MLAKGHHFPN VTLVALLDVD GSLYSSDFRA SERLAQLFIQ VAGRAGRASK PGEVILQTHH
PEHSLLQALL QKDYRHFAMT ALEERKLAQL PPYSFLTLFK AEANQSEVVE DFLRQVRFTL
ESHPLFDDTC MVLGPTPSPL AKRAGKYRWQ LLLQTQHRSL MQKLLTSAKP AIELLPNAKK
VRWNLDIEPQ DLS
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