Gene VEA_001743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001743 
Symbol 
ID8555372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp129370 
End bp129681 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content47% 
IMG OID646404736 
ProductSSU ribosomal protein S10p (S20e) 
Protein accessionYP_003284371 
Protein GI262392517 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000127695 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC AACGTATCCG TATCCGCCTA AAAGCTTTCG ATTACAAACT AATCGATGCT 
TCTACAGCGG AAATCGTTGA AACAGCTAAG CGCACTGGCG CACAGGTTCG TGGTCCAATC
CCACTGCCAA CTCGTAAAGA GCGTTTCACA GTTCTTATCT CTCCACACGT TAACAAGAAA
GCACGTGACC AGTACGAAAT CCGTACTCAC AAGCGTCTAA TCGACATCGT TGAGCCAACA
GACAAGACTG TTGATGCTCT AATGCGTCTA GACCTTGCTG CGGGCGTTGA CGTTCAAATT
AGCCTAGGTT AA
 
Protein sequence
MQNQRIRIRL KAFDYKLIDA STAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKK 
ARDQYEIRTH KRLIDIVEPT DKTVDALMRL DLAAGVDVQI SLG