Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001730 |
Symbol | |
ID | 8555359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 123312 |
End bp | 123851 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646404723 |
Product | LSU ribosomal protein L5p (L11e) |
Protein accession | YP_003284358 |
Protein GI | 262392504 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000273991 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAC TGCATGATTA CTACAAGTCG TCTGTAGTCG CTGAACTGAC CAAACAGTTC GGTTACACAA GCGTCATGCA AGTCCCTAGA ATCGAGAAAA TCACCCTAAA CATGGGTGTT GGTGAAGCAA TCAACGATAA GAAACTGCTA GAAAATGCAG CGTCTGATAT GGCAACGATC TCTGGTCAAA AGCCACTTAT CACAAAAGCG CGCAAATCTG TTGCAGGTTT CAAAATCCGT GAAGGCTACC CTATCGGTTG TAAAGTAACC TTGCGTGGCG AACGTATGTG GGATTTTCTT GAGCGTTTAA TTAACATCGC TCTTCCACGT GTACGTGACT TCCGTGGTGT TAGCGCTAAG TCTTTTGACG GTCGCGGTAA CTACAGCATG GGCGTTCGCG AGCAAATCAT CTTCCCGGAA ATCGACTTTG ATAAAGTTGA TCGTGTACGC GGTTTAGACA TCACTATTAC GACGTCTGCT GGTACTGATG AGGAAGGCCG TGCTCTGCTG GCTGCCTTTA ACTTCCCATT CCGTAAGTAA
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Protein sequence | MAKLHDYYKS SVVAELTKQF GYTSVMQVPR IEKITLNMGV GEAINDKKLL ENAASDMATI SGQKPLITKA RKSVAGFKIR EGYPIGCKVT LRGERMWDFL ERLINIALPR VRDFRGVSAK SFDGRGNYSM GVREQIIFPE IDFDKVDRVR GLDITITTSA GTDEEGRALL AAFNFPFRK
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