Gene VEA_001719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001719 
Symbol 
ID8555348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp118094 
End bp118483 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content50% 
IMG OID646404712 
ProductSSU ribosomal protein S11p (S14e) 
Protein accessionYP_003284347 
Protein GI262392493 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000259501 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAC AACCAACTCG CGCTCGTAAG CGCGTACGCA AGCAAGTTGC AGATGGCGTT 
GCGCACATCC ATGCTTCTTT CAATAACACA ATCGTAACCA TTACTGACCG TCAAGGTAAC
GCTCTTGCAT GGGCTACTGC AGGTGGTTCT GGTTTCCGTG GTTCTCGTAA GTCTACTCCG
TTCGCTGCAC AGGTTGCTGC TGAGCGTTGT GCTGAAATGG CTAAAGAATA CGGCCTAAAG
AACTTGGAAG TTATGGTTAA GGGTCCTGGT CCAGGTCGCG AATCTACTGT TCGTGCACTA
AACGCCGCTG GTTTCCGCAT CACAAACATC GTTGATGCTA CACCAATCCC TCATAACGGT
TGTCGTCCAC CTAAGAAACG TCGCGTATAA
 
Protein sequence
MAKQPTRARK RVRKQVADGV AHIHASFNNT IVTITDRQGN ALAWATAGGS GFRGSRKSTP 
FAAQVAAERC AEMAKEYGLK NLEVMVKGPG PGRESTVRAL NAAGFRITNI VDATPIPHNG
CRPPKKRRV