Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001657 |
Symbol | |
ID | 8555286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 55066 |
End bp | 56157 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646404650 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_003284285 |
Protein GI | 262392431 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGACA AATCATACAA AATTGCTGTC CTACCCGGTG ACGGCATCGG CCCGGAAGTA ATGGCGCAAG CACACAAGGT ATTGGATGCT ATCGAAAAGA AGCACGGTAT TGCGTTTGAG CGTGACGAAC ATGATGTAGG CGGCATCGCG ATCGATAATC ATGGCAGCCC ACTTCCAGAA AGCACCGTAA AAGCGTGTGA AGAGTCTGAT GCAGTACTAT TTGGCTCGGT TGGCGGCCCG AAGTGGGAGC ACTTGCCACC CAACGACCAA CCTGAACGCG GTGCCTTACT ACCACTACGC AAACACTTCC AACTGTTTTG TAACCTACGC CCAGCGCAAA TCCACGCAGG CCTGGAAGCT TTCTCACCAC TTCGTGCTGA CATCTCAGGC CGTGGTTTTG ACATCGTGGT AGTCCGTGAA CTGACTGGTG GTATCTATTT CGGTCAACCA AAAGGCCGTG AAGGCGAAGG CGCAACAGAA AAAGCGTTTG ATACTGAGGT GTACCACCGC TTTGAGATCG AACGTATTGC AAAAATCGCT TTTGAGTCTG CTCGTCTACG TCGCAAGAAA GTGTGCTCTA TCGACAAAGC GAACGTTCTA CAAAGCTCTA TTCTATGGCG TGAAGTAGTC GAAGAAATCG CAAAAGATTA CCCAGATGTC GAGCTATCAC ACATGTACAT CGACAACGCA ACCATGCAGC TTATCAAAGA CCCAGCTCAG TTCGACGTGA TGCTGTGTTC AAACATCTTC GGCGACATCA TTTCCGATGA GTGCGCAATG ATCACTGGCT CTATGGGTAT GCTGCCTTCA GCGAGCCTAA ACGAAAGCAA ATTCGGTCTG TACGAGCCAG CAGGCGGCAG TGCACCCGAT ATCGCAGGTA AGAACATCGC TAACCCAGTG GCGCAAATCC TATCTGCGGC ACTGATGTTA CGTTATAGCC TTGGCGAAGA AGCCGCAGCA CAAGACATCG AAGCAGCGGT GTCGAAAGCA CTTTCAGCTG GCGAGCTAAC AGGCGACCTT GCAGGCAACA ACCCGGCACT TACAACATCA GAGATGGGCG ATAAGATCGC TGAGTACATC CTAAACTCGT AA
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Protein sequence | MTDKSYKIAV LPGDGIGPEV MAQAHKVLDA IEKKHGIAFE RDEHDVGGIA IDNHGSPLPE STVKACEESD AVLFGSVGGP KWEHLPPNDQ PERGALLPLR KHFQLFCNLR PAQIHAGLEA FSPLRADISG RGFDIVVVRE LTGGIYFGQP KGREGEGATE KAFDTEVYHR FEIERIAKIA FESARLRRKK VCSIDKANVL QSSILWREVV EEIAKDYPDV ELSHMYIDNA TMQLIKDPAQ FDVMLCSNIF GDIISDECAM ITGSMGMLPS ASLNESKFGL YEPAGGSAPD IAGKNIANPV AQILSAALML RYSLGEEAAA QDIEAAVSKA LSAGELTGDL AGNNPALTTS EMGDKIAEYI LNS
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