| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001656 |
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| Symbol | |
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| ID | 8555285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 53436 |
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| End bp | 54983 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646404649 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003284284 |
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| Protein GI | 262392430 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATC AGGTCATTAT ATTCGACACC ACATTGCGTG ATGGCGAGCA AGCGTTGTCA
GCAAGCTTGA CGGTTAAAGA AAAACTGCAA ATTGCCTATG CGCTGGAAAG ACTCGGCGTT
GATGTTATCG AAGCTGGCTT CCCAATCTCT TCACCTGGTG ATTTCGAGTC GGTACAAACC
ATTGCAAAAA ACATCAAAAA CAGTCGAGTT TGTGCCCTTT CGCGTGCCGT TGCGAAAGAT
ATTGATGCCG CCGCTGAAGC ATTAAAAGTG GCCGACCAAT TCCGTATTCA CACGTTTTTA
GCCACTTCCA CCATTCACGT AGAAGACAAA CTACGCCGCA GCTACGACGA TGTACTTGAA
ATGGCGGTCA ACGCCGTTAA ACATGCGCGT AACTACACCG ATGATGTCGA GTTTTCTTGT
GAAGATGCAG GGCGTACTCC TATCGACAAC CTATGTCGCA TGGTAGAAGC TGCCATCAAT
GCAGGTGCGA GCACAATCAA CATTCCAGAT ACCGTTGGCT ACACAGTACC AAGCGAGTTT
GGTGGCATTA TTCAAACCCT TTTCAACCGC GTTCCAAACA TTGATAAAGC GATCATCTCC
GTTCACTGTC ACGACGATTT GGGGATGTCA GTTGCCAACT CTATTGCCGC CGTTCAAGCT
GGCGCACGTC AGATAGAAGG AACGATTAAT GGCATTGGAG AGCGAGCGGG TAACTGTTCA
CTTGAAGAGA TCGCAATGAT CATCAAGACG CGTCAAGAGT TCTTGGGCGT TCACACTGGC
ATTAAGCATG ATGAAATTCA CCGCACCAGT AAGTTGGTTA GCCAGCTATG CAATATGCCG
ATTCAAAGCA ATAAAGCAAT TGTGGGTGCA AATGCGTTTA GCCACTCTTC AGGCATCCAC
CAAGATGGTA TGTTGAAGAA TAAGAATACC TACGAAATCA TGACCCCTGA GTCTATTGGC
CTAAAAAACC AAGCTCTAAA CCTAACCAGC CGCAGCGGTC GCGCTGCCGT GAAGAGCCAT
ATGGACACGA TGGGTTACAA CGAAGACGAG TACAACCTAG ACGCACTGTA TGCGGATTTC
TTGAAACTTG CTGACCGCAA AGGCCAAGTG TTCGATTACG ATCTAGAGGC CCTAATGCAC
TTCTCGAACC TGCGTGAAGA AGATGACTTC TACAAACTGA ACTACCTAAG CGTGCAATCG
GGCAGCGTAA TGGCCACCAC CAGCATCAAA ATGCAATGTG GCGATGAAGA AATGTGTGAA
GCGGCAGTCG GTAATGGCCC AGTTGATGCG CTATACCAAT GTATCTACCG CGTGACAGGC
TACGACATCG TACTGGATAA ATTCGACCTA ACCGCGAAAG GCGAAGGTGA AGATGGTTTG
GGTCAAGCTG ACATCATTGC CAACTACAAA GGTCGTAAAT ACCACGGTAC AGGCGTTTCC
ACCGATATCG TTGAAGCTTC CGGCCAAGCA CTATTGCACG TTATTAATAG CATCCACCGT
GCAGACAAAA TCGAAGAAAT GAAGCAGAAA AAGATTGCGA CTGTGTAA
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| Protein sequence | MNDQVIIFDT TLRDGEQALS ASLTVKEKLQ IAYALERLGV DVIEAGFPIS SPGDFESVQT
IAKNIKNSRV CALSRAVAKD IDAAAEALKV ADQFRIHTFL ATSTIHVEDK LRRSYDDVLE
MAVNAVKHAR NYTDDVEFSC EDAGRTPIDN LCRMVEAAIN AGASTINIPD TVGYTVPSEF
GGIIQTLFNR VPNIDKAIIS VHCHDDLGMS VANSIAAVQA GARQIEGTIN GIGERAGNCS
LEEIAMIIKT RQEFLGVHTG IKHDEIHRTS KLVSQLCNMP IQSNKAIVGA NAFSHSSGIH
QDGMLKNKNT YEIMTPESIG LKNQALNLTS RSGRAAVKSH MDTMGYNEDE YNLDALYADF
LKLADRKGQV FDYDLEALMH FSNLREEDDF YKLNYLSVQS GSVMATTSIK MQCGDEEMCE
AAVGNGPVDA LYQCIYRVTG YDIVLDKFDL TAKGEGEDGL GQADIIANYK GRKYHGTGVS
TDIVEASGQA LLHVINSIHR ADKIEEMKQK KIATV
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