Gene VEA_001648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001648 
Symbol 
ID8555277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp44088 
End bp44582 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content48% 
IMG OID646404641 
Productacetolactate synthase small subunit 
Protein accessionYP_003284276 
Protein GI262392422 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00890505 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACACA TTATTTCATT GCTATTGGAA AACCAACCGG GTGCGTTGTC TCGTGTTGTT 
GGCTTGTTCT CTCAACGTGG TTACAACATT GAATCTTTGA CGGTATCACC GACAGATGAT
GAAACGCTGT CGCGAATGAA CATTACCACG ACGTCTGATG AGATGCAGTT GGAGCAAATT
CAGAAGCAGT TACACAAATT GATCGATGTG CTGAAAGTAC AAGAAGTCAC CGAGTATGAG
CACATCGAAC GTGAACTGAT GATGGTGAAA GTGAAAGCCA GCGGTTTTGC GCGAGCAGAA
GTGAAACGGA CGGCAGACAT CTTCCGTGGC CAGATCGTGG ATGTCACTGC TGCTCAATAC
ACGGTACAAC TTGCGGGCAC GAGTGAAAAG TTGGATGCCT TCATTCAAGC GATATCTGAA
GTAACTGAAG TCGTCGAAGT TGCTCGTAGT GGGGTAGTGG GCATTGCCCG AGGTGAGCGC
GCACTCAAAC CTTAG
 
Protein sequence
MRHIISLLLE NQPGALSRVV GLFSQRGYNI ESLTVSPTDD ETLSRMNITT TSDEMQLEQI 
QKQLHKLIDV LKVQEVTEYE HIERELMMVK VKASGFARAE VKRTADIFRG QIVDVTAAQY
TVQLAGTSEK LDAFIQAISE VTEVVEVARS GVVGIARGER ALKP