Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001632 |
Symbol | |
ID | 8555261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 22323 |
End bp | 24275 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404625 |
Product | phosphotransferase system mannitol-specific |
Protein accession | YP_003284260 |
Protein GI | 262392406 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component |
TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCAC CAGATGCCAA GATCAAGATA CAAAATTTTG GTCGTTTTCT GTCAAACATG GTAATGCCTA ACATCGGCGC GTTTATCGCG TGGGGCTTTA TCACTGCTCT ATTTATCCCA ACCGGATGGC TACCAAATGA GACGTTAGCT TCCATGGTTG GTCCTATGAT CACTTACTTG CTGCCACTAC TTATCGGTTA CACCGGTGGT AAGTTAGTGG GCGGCGATCG CGGCGCGGTC GTTGGTGCAA TCACAACCAT GGGCGTGATC GTCGGTACCG ACATCCCAAT GTTTATGGGC GCAATGATGG TTGGCCCAAT GGGTGGCTGG GCTATCAAAA AATTCGATAA CTACATCGAC GGTAAAGTAA AAAGCGGCTT CGAGATGTTG GTGAACAACT TCTCTGCGGG CATCATTGGT ATGCTGTGCG CCATTTTGGC TTTCTTCCTT ATCGGTCCAT TTGTCAAAGT GCTTTCAGGC GCATTGGCAG CAGGCGTAAA CTTCCTTGTT TCAGCGCACC TTCTGCCACT GACTTCTATT TTTGTTGAGC CAGCGAAGAT CCTGTTCCTA AACAACGCGA TCAACCACGG CATCTTCTCT CCACTGGGCA TTCAGCAAGC GTCTGAAACT GGTCAATCGA TCTTCTTCTT GATCGAGGCG AACCCAGGTC CTGGCTTAGG TATCTTGCTG GCTTACATGG TGTTTGGTAA AGGTACGGCT CGTCAAACGG CAGGTGGTGC ATCCATCATC CACTTCTTCG GCGGTATCCA CGAGATTTAC TTCCCTTACA TCCTAATGAA CCCTCGCCTA ATCCTTGCGG CTATCGCAGG TGGTATGACG GGCGTATTCG TTCTAACTAT GTTTAACGCA GGTATCGTTT CTCCAGCATC ACCAGGCTCA ATCTTCGCAA TCTTGTTGAT GACTCAGAAA GGTTCAATCG TTGGTGTTCT AGCGTCTATC GCAGCAGCAA CAGGCGTGTC ATTCGCCGTA GCAGCACTGC TAATGAAGAC TCAAACGTCA ACAGAAGAAG ACGGTGATGA AGCAGCACTA GAGAAAGCAA CATCACAAAT GAAAGACATG AAATCTGCAT CTAAAAACGA TGCGGTGGTA AACAGCCAAA GCAAAGGTGA CGTAGACCTA GCGACAGTAC AAAGCATCAT TGTCGCTTGT GATGCGGGCA TGGGCTCGAG TGCAATGGGC GCGAGCATGC TACGCAAAAA GGTTCAAGAC GCAGGTCTGA ACATCCACGT AACCAACCTT GCCATTAACA GCTTACCAGA GAGTGCAGAT ATCGTGATTA CTCATAAAGA CTTAACGGAT CGTGCACGTA AGCATGCTCC AAACGCACAC CACATTTCAT TGACTAACTT CCTAGACAGT GAAATGTACA ACCAGCTAGT CACCAAACTA CTAGCAGCAC AAAACCAATC CGCAGCCAAT GACGACCAAA TGGTGAAAGT GTCAGTCATG GCGGCGAACG ACGACTGCTT TGAGCCACAG CAGCCATCGG TATTCCAAAT CCAGCGTGAG AACATTCACC TAGGTTTGAA AGCAGCCAAC AAAGAAGAAG CCATTCGCTT TGCAGGCAAC AAATTGGTTG AACTTGGCTA CGCAGAACCA GAATACGTAG ACGCGATGTT TGAGCGTGAA GCGTTGGTTC CAACTTACCT TGGCGAGTCT ATCGCGGTTC CTCATGGCAC CGTAGAAGCG AAAGACCGCG TGAAGAAAAC TGGCATTGTA ATCTGCCAAT ACCCATCGGG TATCCAATTT ACTGAAGATG ACGACGATGT CGCGAAACTG GTTATCGGCA TTGCCGCTAA GAACGATGAG CACATCCAGG TAATCACCAC CATAACGAAC GCGCTCGATG AGCCGGAAGC AATTGAGAAG CTAACCAGCA CCAACGATGT AGAAGAAATT CTTAACATCC TTGGCGGTCA ACAAGCGGCT TAA
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Protein sequence | MISPDAKIKI QNFGRFLSNM VMPNIGAFIA WGFITALFIP TGWLPNETLA SMVGPMITYL LPLLIGYTGG KLVGGDRGAV VGAITTMGVI VGTDIPMFMG AMMVGPMGGW AIKKFDNYID GKVKSGFEML VNNFSAGIIG MLCAILAFFL IGPFVKVLSG ALAAGVNFLV SAHLLPLTSI FVEPAKILFL NNAINHGIFS PLGIQQASET GQSIFFLIEA NPGPGLGILL AYMVFGKGTA RQTAGGASII HFFGGIHEIY FPYILMNPRL ILAAIAGGMT GVFVLTMFNA GIVSPASPGS IFAILLMTQK GSIVGVLASI AAATGVSFAV AALLMKTQTS TEEDGDEAAL EKATSQMKDM KSASKNDAVV NSQSKGDVDL ATVQSIIVAC DAGMGSSAMG ASMLRKKVQD AGLNIHVTNL AINSLPESAD IVITHKDLTD RARKHAPNAH HISLTNFLDS EMYNQLVTKL LAAQNQSAAN DDQMVKVSVM AANDDCFEPQ QPSVFQIQRE NIHLGLKAAN KEEAIRFAGN KLVELGYAEP EYVDAMFERE ALVPTYLGES IAVPHGTVEA KDRVKKTGIV ICQYPSGIQF TEDDDDVAKL VIGIAAKNDE HIQVITTITN ALDEPEAIEK LTSTNDVEEI LNILGGQQAA
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