| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001619 |
|---|
| Symbol | |
|---|
| ID | 8555247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 8864 |
|---|
| End bp | 9679 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646404611 |
|---|
| Product | beta-ketoadipate enol-lactone hydrolase |
|---|
| Protein accession | YP_003284247 |
|---|
| Protein GI | 262392393 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00597314 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGT TTGAAATTGA AGGTCAGCAA CTTGCTTACC TTGATAAAGG TGATGGTCCA
GCATTACTGT TTGGTCACAG TTATTTGTGG GATAGCCAAA TGTGGGCGCC ACAAATTGAA
GTTTTAAGCC AGTCATATCG TTGTATTGTG CCAGATTTGT GGGCACATGG TGAGTCAGAA
GCGGCCCCTG CATCGACAAA GTCATTAGTT GATTATGCAC AACATATGTT GGCGTTGATG
GATCATTTGG ATATTGAAGA GTTTTCTGTG GTGGGCTTAT CTGTTGGCGG CATGTGGGGA
GCGGAACTGA CGGCTCAAGC ACCGCAACGT GTGAAATCAC TGGTATTGAT GGATACCTTC
ATTGGCTGGG AGCCAGAAGT TACGTATAAA AAGTACTTTG CAATGCTTGA TACCATTAGC
CAAGTCCAAG CGGTGCCTGC GCCAATTATT GAAGCCGTTG TGCCGCTGTT CTTTGCCAAC
AACGTCGATC AGGATAACCC TGAACTTGTC GCTTCATTCA AACGCAGTTT AGAAGACCTC
AACGGTGAGC TTGCGGTTGA AGTAGCTCGC ATGGGACGCA TGGTGTTTGG TCGCCGTGAT
GTGATTGAAG ATTCGGAAAA ATTCGCTCTG CCGACATTAA TTGCGGTGGG CTGTGAAGAT
AAGCCTCGCC CGGTTTTCGA ATCGTATTTA ATGAAAGACT GTATCACGGG CAGTGAGTTG
GTAGAAATTC CGCAAGCGGG ACACATCAGT TGTTTAGAAC AGCCGGAGTT CGTCAACCAA
ATGTTGTTGA ACTTCCTGAA TCGAGTTCAT GCATAA
|
|---|
| Protein sequence | MNKFEIEGQQ LAYLDKGDGP ALLFGHSYLW DSQMWAPQIE VLSQSYRCIV PDLWAHGESE
AAPASTKSLV DYAQHMLALM DHLDIEEFSV VGLSVGGMWG AELTAQAPQR VKSLVLMDTF
IGWEPEVTYK KYFAMLDTIS QVQAVPAPII EAVVPLFFAN NVDQDNPELV ASFKRSLEDL
NGELAVEVAR MGRMVFGRRD VIEDSEKFAL PTLIAVGCED KPRPVFESYL MKDCITGSEL
VEIPQAGHIS CLEQPEFVNQ MLLNFLNRVH A
|
|---|
| |