Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_4420 |
Symbol | |
ID | 8553802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 4728864 |
End bp | 4730699 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003275453 |
Protein GI | 262204245 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.921318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCCACT ACAAGAGCAA CATGCGCGAC CTCCAGTTCA ACCTCTTCGA ACTGTTCGAA CTCGACAAGG TCCTGGAATC GGGCGAGTTC GGCGACCTTG ATCACGAGAC CGCCGTCGAC ATGCTGCGCG AGGTCAAGGC CCTGGCCGAG GGGCCCATCG CGGAGTCGTT CGTCGACGCC GACCGTAACC CGCCGGTCTT CGACCCCGAG ACCCATTCGG TGACGATCCC CGAATCCTTC ACCAAGTCCT ACAACGCACT CATCGAGGGC GGCTGGGACA AGATCGGCAT CGCCGACGAA CTCGGCGGCC TGCCCGCTCC TCGCTCGCTC TACTGGGCGA TCGGCGAGAT GATCCTCGGT GCCAACCCGT CGGTGTTCAT GTACGCCGCC GGCGCCGGCT TCGCCAACAT CTTCTTCAAC AACGGCACCG ACGAGCAGAA GAAGTGGGCG GCAATCTGTT CCGAGCGCGG CTGGGGAGCC ACCATGGTGC TCACCGAGCC CGACGCAGGT TCCGATGTGG GCGCCGGACG GACCAAGGCC ACCCAGCAGG AAGACGGCTC CTGGCACATC GACGGCGTCA AGCGGTTCAT CACCTCCGCC GACCAGGACA TGACCGAGAA CATCTTCCAC CTCGTGCTCG CCCGTCCCGA AGGCGCCGGC CCGGGCACCA AGGGGCTCTC GCTGTTCTTC GTGCCGAAGT TCCACTTCGA CTTCGAGACC GGCGAACTCG GCGAACGCAA CGGCGTATTC GTCACCAACG TCGAACACAA GATGGGGCTC AAGGCGTCGG CCACCTGTGA GGTCACCTTC GGCCAGCACG GGACCCCGGC CAAGGGCTGG CTCGTCGGCG AGGTCCACAA GGGCATCGCG CAGATGTTCG AGGTCATCGA GCACGCCCGA ATGATGGTGG GCACCAAGGC CATCTCCACC CTTTCCACCG GCTACCTCAA TGCGCTCGAT TACGCCAAGG AGCGTGTCCA GGGCGCCGAC ATGACCCAGA TGACCGACAA GTCCGCACCG CGCGTGACCA TCACCCACCA CCCGGATGTG CGTCGCTCGC TGATGACCCA GAAGGCCTAC GCCGAGGGCC TGCGCGCGAT CTACCTGTAC ACCGCGTCGC ACCAGGATGT CGCTGCCGCA CAGATCGTCT CCGGCGCCGA CGCCTCGATG GCCCACCGTG TCAACGATCT GCTCCTGCCG ATCGTCAAGG GCGTCGGCTC CGAGCGGGCC TACGCCAACC TCGGCCACGA GTCGCTGCAG ACCCTGGGCG GGTCGGGCTT CCTGCAGGAC TACCCGATCG AGCAGTACAT CCGCGACTCC AAGATCGACT CCCTCTACGA GGGCACCACG GCCATCCAGG CGCAGGACTT CTTCTTCCGC AAGATCATCC GCGACAAGGG CCAGGCCCTC GCACACGTCG CCGGGCAGAT CCAGTCGTTC ATCGACTCCG AGGCAGGCAA CGGTCGGCTC AAGGCCGAGC GTCAGCTACT GAAGACCGCG CTCGATGACG TGCAGGCGAT GGCGGCCTCG CTGACCACCA ATCTGATGGC AGCACAAGAG GATTCCAAGG AGCTCTACAA GGTGGGGCTC GGCTCCGTCC GCTTCCTCAT GAGCGTCGGC GACCTGCTCA TCGGCTGGTT GCTGCTGCGT CAGGCGCAGA TTGCGCTCGG CAAGCTCGAC GAGGGTGCGA CCGGCGACGA CAAGGCCTTC TACGATGGCA AGGTCGCCGT GGCGAGCTTC TTCGCGAAGA ACATGCTGCC GCTGCTCACC TCCATCCGCG TCACCGTCGA GAACGTTGAC AACGACATCA TGGAACTCGA CGAGGCGTCC TTCTGA
|
Protein sequence | MGHYKSNMRD LQFNLFELFE LDKVLESGEF GDLDHETAVD MLREVKALAE GPIAESFVDA DRNPPVFDPE THSVTIPESF TKSYNALIEG GWDKIGIADE LGGLPAPRSL YWAIGEMILG ANPSVFMYAA GAGFANIFFN NGTDEQKKWA AICSERGWGA TMVLTEPDAG SDVGAGRTKA TQQEDGSWHI DGVKRFITSA DQDMTENIFH LVLARPEGAG PGTKGLSLFF VPKFHFDFET GELGERNGVF VTNVEHKMGL KASATCEVTF GQHGTPAKGW LVGEVHKGIA QMFEVIEHAR MMVGTKAIST LSTGYLNALD YAKERVQGAD MTQMTDKSAP RVTITHHPDV RRSLMTQKAY AEGLRAIYLY TASHQDVAAA QIVSGADASM AHRVNDLLLP IVKGVGSERA YANLGHESLQ TLGGSGFLQD YPIEQYIRDS KIDSLYEGTT AIQAQDFFFR KIIRDKGQAL AHVAGQIQSF IDSEAGNGRL KAERQLLKTA LDDVQAMAAS LTTNLMAAQE DSKELYKVGL GSVRFLMSVG DLLIGWLLLR QAQIALGKLD EGATGDDKAF YDGKVAVASF FAKNMLPLLT SIRVTVENVD NDIMELDEAS F
|
| |