Gene Gbro_4100 details

Gene Information

• Locus tag: Gbro_4100
• ID: 8553481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: +
• Start bp: 4402032
• End bp: 4402610
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 68%
• Product: RNA polymerase sigma factor, sigma-70 family
• Protein accession: YP_003275158
• Protein GI: 262203950

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATTT CCGCGCACCC CACAGCCGGC CCCGACGACC TGGGCGCATT GCTCGACCGT 
GTCGGCAAGG GCGATGCCGC CGCCTTCGCC ACCTTCTACG ACCTCACCGC GCAGCGCGTG 
TACGGCATGG CGCTACGGGT CATACGCGAC CGCGGCTTCA GTGAGGAGAT CACCCAGGAG 
GTGTACCTGA CGGTGTGGCG GACCGCGAAC ACCTTCGACG GCTCGTCGGG ATCGGCTCTG 
TCGTGGGTGC TGACCATGGC GCATCGCCGG GCCGTGGATC GCGTCCGGTC GGAGGTCGCC 
AGCCGCCGTC GCACGCTCGC GCATGGTCAG GCGGCGATCA CCCCTCCGTT CGACGAGGTC 
ACCGAGATCA GTGAGCGGCG CGAGGCCGCC CGACTGGTGC GCTCCGGCCT GCAACGACTC 
ACGCCTGCGC AGCGAGAGTC CATCGAGCTT GCCTACTTCG ACGGACTCAC CTATCGCGAA 
GTGGCAGAAC GACTTCAGGT TGCACTTCCC ACGGTGAAGT CACGAATCCG GGACGGTATG 
CGGCGTCTGC GGCTCAGCGT CGCCGACACC GCGGCCTGA 

 

Protein sequence

MTISAHPTAG PDDLGALLDR VGKGDAAAFA TFYDLTAQRV YGMALRVIRD RGFSEEITQE 
VYLTVWRTAN TFDGSSGSAL SWVLTMAHRR AVDRVRSEVA SRRRTLAHGQ AAITPPFDEV 
TEISERREAA RLVRSGLQRL TPAQRESIEL AYFDGLTYRE VAERLQVALP TVKSRIRDGM 
RRLRLSVADT AA