| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3585 |
|---|
| Symbol | |
|---|
| ID | 8552965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 3812105 |
|---|
| End bp | 3812593 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003274668 |
|---|
| Protein GI | 262203460 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00428581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCAT CGAACCCGAA ACGCAGCGCG GGCATCCTCC TGTATCGGCG CGTCGGCAAT
GATCTCGAAG TGCTGATCGC ACACCCCGGC GGGCCGCTCT GGGCCCGCAA GGACGAGGGC
GCGTGGTCGA TCCCGAAGGG GTTGCCCGAA CCGGGGGAGT CGGCGTGGCA GACCGCGCGG
CGCGAGTTCG CCGAGGAGAC CGGCACCGCC CTGCCCGACG GTGAGCATCT CGATCTCGGT
GAGGTGCAAT TGAAGAGCGG CAAAGTCGTC ACCGGCTTCG CCGTCGAATC CGACTTCGAA
CCGGATTCGT TGCACAGCAA CACATTCGAG ATGATCTGGC CGCCGCGATC GGGTCGTCTG
CAGGAGTTCC CGGAGATCGA CCGCGCGCAA TGGTGCGCGC CCGGGGTCGC GAAGCGCAAA
CTCAATCCGG CACAGGGGGT CTTCGTCGAC CGGCTGCTCG ACGCCCTCGG CCTTCAGTCG
AGCAGATAG
|
|---|
| Protein sequence | MTPSNPKRSA GILLYRRVGN DLEVLIAHPG GPLWARKDEG AWSIPKGLPE PGESAWQTAR
REFAEETGTA LPDGEHLDLG EVQLKSGKVV TGFAVESDFE PDSLHSNTFE MIWPPRSGRL
QEFPEIDRAQ WCAPGVAKRK LNPAQGVFVD RLLDALGLQS SR
|
|---|
| |