| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3413 |
|---|
| Symbol | |
|---|
| ID | 8552788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 3638762 |
|---|
| End bp | 3639604 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003274503 |
|---|
| Protein GI | 262203295 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC ATACTTCGAG CCCGGGGACC ACTGCAGTCG GTGAGGTCGG TGCGCAGTCC
ACGGCCACGC GATCCGACAG ATCGGTTCGC CGCGACCGCA TCTACACCGG TATCCGGGTG
TGCTCACCGT TGGCGGTCCT GGTGTTGTGG CAGGTGGGCA GCGCGCTGGG AATCTTGCCG
CAGGACAAGT TGCCTGCGCC GTCGCTGATC GCCCAGGCCG GATGGGAACT GCTGGTCGAC
GGGCAACTCG TGGACGCGAT CGGGGCGTCT GCGCAGCGCG CGGCAATCGG ATTGGCCGTC
GCGGTGATCG TCGGCGTCGG GCTCGGCGTG CTGGTCGGGT TGAACAGGTT GTCCGATGCC
GTGGTCGACC CCAACATGCA GGCGATCAGA GCGCTGCCAC TCTTCGGTCT GATCCCGTTG
TTCATACTGT GGTTCGGGAT CGGCGAAGTG CCCAAGGTGC TGCTGGTGGC GTTGGGTGCG
ATGTTGCCGC TGTATCTCAA CACCTCCGGT GCCATCCGCC AGATCGATAG GCGGCTGGTG
GAAACTGCTC GGGTACTGGG CTTTTCGCGA ATCACAACCA TCCGTGAGCT GATCATCCCG
GCAGCGATGC CGCAGATTCT GGTCGGATTG CGGCAGGCGC TGGCCATTGC ATGGCTGAGC
CTGATCGTCG CCGAACAGAT CGCGGCCACC TCGGGCCTGG GGTACCTGAT CAACAACGCG
CGTGACTTCC TGCGCATCGA CCAGGTCATC TTCGGCCTGA TCGTCTATGC CGCAATGGGA
TTGATCACCG ACGCCATCGT GCGCGCACTG GAGCGATACA CCACCCGATA CCGACGACAA
TGA
|
|---|
| Protein sequence | MAEHTSSPGT TAVGEVGAQS TATRSDRSVR RDRIYTGIRV CSPLAVLVLW QVGSALGILP
QDKLPAPSLI AQAGWELLVD GQLVDAIGAS AQRAAIGLAV AVIVGVGLGV LVGLNRLSDA
VVDPNMQAIR ALPLFGLIPL FILWFGIGEV PKVLLVALGA MLPLYLNTSG AIRQIDRRLV
ETARVLGFSR ITTIRELIIP AAMPQILVGL RQALAIAWLS LIVAEQIAAT SGLGYLINNA
RDFLRIDQVI FGLIVYAAMG LITDAIVRAL ERYTTRYRRQ
|
|---|
| |