Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_3407 |
Symbol | |
ID | 8552782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 3631547 |
End bp | 3634003 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | patatin-related protein |
Protein accession | YP_003274498 |
Protein GI | 262203290 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCTT CCACCTCGAG CACTGCCGCG TCCACGATCT CCACCCAGAC CCGTCCCGAA ACCGCCGAAT TGCGTCTCGC CCTCGTCTGC TACGGCGGGG TATCGCTTGC CGTGTACATG CACGGCGTGA CCAAAGAACT GTACAAATTG GTGCAGGCCT CGCGCGCCCT CGACGCTCGA GATGATCCGT CACAGGCGGA AAATCCATTC CCCTCCGACG ACACCACCTC GGTCTACTTC GACACCCTGA AAACACTCGC CGACCGGCAG CATCCGTTGT CGGTGAGTAT CGACATCGTC GGCGGTACGT CCGCGGGCGG AATCAACGGT GTTGCCCTGG CCAAGGGCAT CGCGCTCAAC GCCGACCAGG AGGGTCTGAA GAAGGTGTGG ATCTCCGGGG GCGATCTACG ACAACTCCTG CGGGCGCCCC GCCGGTTGCC ACTCGTCCTG CAGACCGCGT GGGCGGCATG GAACAGCGCG CGGCATGGGC AGTCGCTGCT GAAGTCCGAA CTCATGTCCG AGCTGCTCCG AAAAGCGTTG CTGGACATGG ACCCCGACGA TGACAAGCCG AACTCACCGG CGACGCTCAT TCCGAAGGGC GGCAATCTGT CCCTGTATGT GCAGACGACC GATCGGCAGG GTTTCGACAT CACGGTCCCC ACCGGCATCG GCGGCGCGAG CCAGCGCGAC CGGTGGTACT CGCAGGTCCT GCAGTTCTTC GCCTCCCACG AGGATCGCGA GCAGTTCGCC GCGCAGTACA CGCGCACGTT GGCGTTCGCG GGACGCGTCA GTTCGTCGTT TCCGGCCGCC TTCGCCCCGG TCAGCGTCGA AGGGTTCGCT GGTGAACTCA TCGCCGAATG CCGGCCGGGT GAGTGCACAA CGGTGCACGG CCAGCAGGTG TTCCGTTACG ACTATGCGGA AAACGGTTAC ACCGCCGACG AGCGCCTGTT TGTCGACGGC GGACTCCTGA ACAACTCGCC GTTCGATCTC GTCATCGACA CGATCGCCGC ACAACCGGCG TCGCGGAAGG TGCTCCGCGA GTTGGTCTAT ATCGAGCCGG ATCCCGCTCG ACCTCTCGAT GACGGTTCGG TCGACGATTC CAGCGGCGCC AAGTCCGGGT TCTTCGGAAA TCTCTTCGCC CTCAAGGCTC CGGCGACCAG TCACAGCTTC GCCGGCGAGC TCATCGCGCT GCGTGACCTC AACCGGAAAA TCGTGGAAAT CGGCACGATC GCCGACCTGC AAATGGATGA GATCACCACC GACATCGTCG CCGAGATCGA CGACGTCGCG CAGGACAACA ACGTCGCCGA CGCCGGCTTT GTCGAAAAGC TCGGCAATCA GGCGTTGGCC AAAGAGATCT CCGACCGCCT GCACTGCAAG AACGAAAAGG CCATGGGCGC AACCTGGAAC ACCTATCAGC GTCTCAAGGC CGTGTCGATC GCGCATCGGA TCGCGACGGC GATCAACAAG AGTCAGAAGC TGCCTCCGCA ATCGAGCACG GCGACCTTCG TGACCGCGGT GATCACCGAA TGGGTTCATC AACTCCCCGC GTTTCGCGAG TCCAACGAGA AGGATCTCGG CGAGTTCCTG CAGGCGCTCG ATACGCCCTA CCGCGAACGA CGACTGCTGT TCATCATCGC CGGGATCAAC GAGCTCTACG GCACCGACGC CCCCGCGGAT GTGCTCAACA AGCTGAAGGC GCAGGCCTGG GAGAAACTCT CCGCCACCAA GGCGGCGCCG GACACTGTGG TCGAGAAGCT CGCGGACTCC GGCCTCGTCG CCACGCTCAG TAGGTTCGTG ACCGCAGTGC AGAAGGGCCG GCGAGCATCG GCACCTTTCG AGGATCCGGC CGCGTGGGCA GCGCGCGAAT CTGCGATGAT CGAAGACTTC GTCGGCAAGT ACCGCGTGGC GATCGCCGCC GAGATCGGCG ACGGCAGCAC CGACCTCTGG CAGGCCTTCG CCAGCACTCT GGCGGGCGGC CCCATCGGCT CCACCGAGGA GAGCTCCGAG CAGAACCTGA CTCGTCTGGC CAGCCGATAC CTCGGGTTCC CCCGTTGGGA CGCGATCCTG TTCCCCATCA CCTCACTGTC CGAACTTCCG CAGTTCTCGC CGATACCGGT GTCGCAGTTC AGCCCGATCG CCGCGACCGC CCTGGCGCCC GAGGGGGAAG ACGCGCGCAA GGAGTTTTTC GCGACCAAGC TCGCCGGGTT CGATCTCGCG CACTTCGCCG CCTTCCTCAA GACCGAGTAC CGGGAGAACG ATTACCTGTG GGGCAGGCTC GACGGTGCCG AACTGATTCT CGACCTGCTC AACCGGCGCA TCGACGACGA GGGATCGCGG TATGTGCCGC TCGGCGACGC CTTCCGCGCC ATCCTTGCCT CGGAGAAGGG ACTCAAGGGG GTCGCGAAAC TGCGCAAGGA GCTCGCCGGT CGCGTCGCCG AGAGATTCCC GTCCTGA
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Protein sequence | MASSTSSTAA STISTQTRPE TAELRLALVC YGGVSLAVYM HGVTKELYKL VQASRALDAR DDPSQAENPF PSDDTTSVYF DTLKTLADRQ HPLSVSIDIV GGTSAGGING VALAKGIALN ADQEGLKKVW ISGGDLRQLL RAPRRLPLVL QTAWAAWNSA RHGQSLLKSE LMSELLRKAL LDMDPDDDKP NSPATLIPKG GNLSLYVQTT DRQGFDITVP TGIGGASQRD RWYSQVLQFF ASHEDREQFA AQYTRTLAFA GRVSSSFPAA FAPVSVEGFA GELIAECRPG ECTTVHGQQV FRYDYAENGY TADERLFVDG GLLNNSPFDL VIDTIAAQPA SRKVLRELVY IEPDPARPLD DGSVDDSSGA KSGFFGNLFA LKAPATSHSF AGELIALRDL NRKIVEIGTI ADLQMDEITT DIVAEIDDVA QDNNVADAGF VEKLGNQALA KEISDRLHCK NEKAMGATWN TYQRLKAVSI AHRIATAINK SQKLPPQSST ATFVTAVITE WVHQLPAFRE SNEKDLGEFL QALDTPYRER RLLFIIAGIN ELYGTDAPAD VLNKLKAQAW EKLSATKAAP DTVVEKLADS GLVATLSRFV TAVQKGRRAS APFEDPAAWA ARESAMIEDF VGKYRVAIAA EIGDGSTDLW QAFASTLAGG PIGSTEESSE QNLTRLASRY LGFPRWDAIL FPITSLSELP QFSPIPVSQF SPIAATALAP EGEDARKEFF ATKLAGFDLA HFAAFLKTEY RENDYLWGRL DGAELILDLL NRRIDDEGSR YVPLGDAFRA ILASEKGLKG VAKLRKELAG RVAERFPS
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