| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_3119 |
|---|
| Symbol | |
|---|
| ID | 8552490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 3341617 |
|---|
| End bp | 3344448 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type |
|---|
| Protein accession | YP_003274218 |
|---|
| Protein GI | 262203010 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.304554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACA AGGCAGCAGG CACGACCGGC AGCGCCGACA CCACCAGTGA GCGCAGCGGA
TCCGACGCGG ACCCCCAGCG CAACGGACAC GCGTCCAACC GCGTCCGGGT GATCCGCGAG
GGAGTCGCAT CGTATCTGCC CGACATCGAC CCCGAGGAGA CCGGCGAGTG GCTGGAGTCC
CTCGACCAGC TGATCGATCA GGCCGGTCCG TCCCGGGCGC GCTACCTGAT GCTGCGCCTG
CTCGAGCGCG CCGGCGAGAA GCGGGTGTCC ATCCCGTCGC TGACCTCCAC GGACTACGTC
AACACCATCA CCACCGAACG CGAGCCCTGG TTCCCTGGCG ATGAGGCCGT CGAGCGACGG
TTCCGCCGCA TCCTGCGCTG GAACGCGGCG ATCATGGTCC ACCGCGCCCA GCGACCCGGC
GTCGGTGTCG GCGGCCACAT CTCCACCTAC GCGTCGTCGG CGACGCTCTA CGAAGTCGGC
TTCAATCACT TCTTCCGCGG TCTCGACCAT CCCGGCGGCG GCGACCAGAT CTTCATCCAG
GGCCACGCCG CTCCGGGCAT CTACGCCCGT GCCTTCCTCG AGGGCCGCAT CGACGAGTCC
CGCATGGACG GATTCCGCCA GGAACACAGC CACGCCGGTG AGGGCGGCGG CCTGCCGTCG
TATCCGCACC CCCGGCTGAT GCCGGATTTC TGGCAGTTCC CGACCGTCTC GATGGGCCTC
GGCCCGATGA ACGCCATCTA CCAGGCGCGG TTCAACCACT ACCTGCATGA TCGCGGCATC
AAGGACACCT CGGACCAGCA TGTGTGGGCC TTCCTCGGTG ACGGCGAGAT GGATGAGGCC
GAGTCGCGCG GCTTCGCCAG CTTCGCCGCG ACCGAGGGCC TCGACAACCT CACCTTCGTC
ATCAACTGCA ACCTGCAGCG TCTCGACGGA CCCGTGCGCG GCAACGGCAA GATCATCCAG
GAGCTCGAGT CGTTCTTCCG CGGCGCCGGC TGGAATGTCA TCAAGGTGAT CTGGGGCCGC
GAGTGGGACA AGCTCTTCTA CGCCGACAAG GAAGGGGCGC TGGTGAACCT GATGAACACC
ACGCCCGACG GCGACTTCCA GACCTACCGC GCCAACGACG GTGGATTCAT CCGCGATCAC
TTCTTCGCCC GTGACCCGCG GACCAAAGAA CTCGTCAAGA ACATGTCCGA CGCCGACATC
TGGGAGATGA AGCGCGGCGG GCACGACTAC CGCAAGGTGT ATGCCGCCTA CGCCGCGGCG
ATGGCACACA AGGGTCAGCC GACGGTGATC CTCGCGCATA CCATCAAGGG CTATCTCCTC
GGCAGCCACT TCGAGGGCCG CAACGCGACC CACCAGATGA AGAAGCTGAC CCTCGACGAC
CTCAAGGCCT TCCGCGACAA CAACCGGATC CCGATCACCG ACGCGCAGCT CGAAGAGAAC
CCGTACCTGC CGCCGTACTA CAACCCGGGA CCCGAATCCG CCGAGATCCA GTACATGCTC
GACCGCCGCA AGGCGCTCGG TGGCTCGCTC CCGGCGCGGC GCACCTCCTC CAAGGTGCTG
CGGCCCGACG TCAGCCAGGC GTTGAAAACC GCTGCCAAGG GCTCGGGCAA ACAGCAGGTC
GCGACCACCA TGGCGCTGGT CCGCATTTTC AAGGACCTGT TGCGCGACAA GGAGATCGGC
AAGCGGATCG TCCCGATCAT CCCGGACGAG GCACGCACCT TCGGGATGGA TTCGTGGTTC
CCGAGCCTCA AGATCTACAA CCGCAACGGG CAGCTCTACA CCGCGGTCGA CGCCGAGCTG
ATGCTGGCCT ACAAGGAGAG CTCCGAAGGT CAGATCCTGC ACGAGGGCAT CAACGAGGCC
GGGTCGGCAG CATCATTCAC CGCGGTCGGT ACCTCCTACT CGACCCACGA CGAACCGATG
ATCCCGCTGT ACATCTTCTA TTCGATGTTC GGCTTCCAGC GCACCGGCGA CAGCTTCTGG
GCGGCCGCCG ACCAGATGAC CCGCGGATTC CTCATCGGCG CCACCGCCGG ACGCACGACG
CTGACCGGCG AGGGCCTACA GCACGCGGAC GGTCAGTCTC CGCTGCTCGC CGCCACCAAC
CCGGCGGTGG TCGCCTACGA CCCGGCCTTC GCCTTCGAAC TCGGGCACAT CATCGCCGAC
GGGCTCGAGC GGATGTACGG GGAGAACCCG GAAAACGTCT ACTACTACCT GACCGTCTAC
AACGAGCCGA TCAGCCAGCC GGCCCGGCCG GAGAACCTCG ACGTGGCCGG CGTACTCAAG
GGGATCTATC GCTTCGCCGA CGCCCCCGAG GGCAAAGAGC ACCCGGCCAG CATCCTGGTC
TCGGGGGTCA CGATGCCCGA CGCCCTGCGT GCCCAGGAGT TGCTGGCGCA GGAGTGGAAC
GTGGGCGCCA ACGTGTACTC GGTGACCTCG TGGAGCGAGC TCGCCCGCGA TGGTATCCGG
GCCGACCGCG CCGCCGTCCG GGAACCGTCC GCCGACGGTG CCCGCGCGTA CCTGACCGAA
GTACTCGCCG ACGTCCCCGG ACCGTTCGTG GCGGTCAGCG ACTACATGCG CGGCGTGCAG
GAACAGATCC GCGCGTATGT GCCCGGCACC TACCTGACGC TGGGCACCGA CGGCTTCGGC
TTCTCCGACA CCCGTCCGGC CGCGCGGCGC TTCTTCAACG TCGACGCCGA GTCGATCGTC
GTCGGGGTGC TGGTGGCGCT CGCCCGGGAC GGGCACATCC CGTTCACCGT GGCCCGCGAG
GCCGCCGACA AGTATCAGAT CACCGACGTC AGCGCCGCCG AGGTCTCCTA CGCCGACACC
GGCAGCGCCT GA
|
|---|
| Protein sequence | MTDKAAGTTG SADTTSERSG SDADPQRNGH ASNRVRVIRE GVASYLPDID PEETGEWLES
LDQLIDQAGP SRARYLMLRL LERAGEKRVS IPSLTSTDYV NTITTEREPW FPGDEAVERR
FRRILRWNAA IMVHRAQRPG VGVGGHISTY ASSATLYEVG FNHFFRGLDH PGGGDQIFIQ
GHAAPGIYAR AFLEGRIDES RMDGFRQEHS HAGEGGGLPS YPHPRLMPDF WQFPTVSMGL
GPMNAIYQAR FNHYLHDRGI KDTSDQHVWA FLGDGEMDEA ESRGFASFAA TEGLDNLTFV
INCNLQRLDG PVRGNGKIIQ ELESFFRGAG WNVIKVIWGR EWDKLFYADK EGALVNLMNT
TPDGDFQTYR ANDGGFIRDH FFARDPRTKE LVKNMSDADI WEMKRGGHDY RKVYAAYAAA
MAHKGQPTVI LAHTIKGYLL GSHFEGRNAT HQMKKLTLDD LKAFRDNNRI PITDAQLEEN
PYLPPYYNPG PESAEIQYML DRRKALGGSL PARRTSSKVL RPDVSQALKT AAKGSGKQQV
ATTMALVRIF KDLLRDKEIG KRIVPIIPDE ARTFGMDSWF PSLKIYNRNG QLYTAVDAEL
MLAYKESSEG QILHEGINEA GSAASFTAVG TSYSTHDEPM IPLYIFYSMF GFQRTGDSFW
AAADQMTRGF LIGATAGRTT LTGEGLQHAD GQSPLLAATN PAVVAYDPAF AFELGHIIAD
GLERMYGENP ENVYYYLTVY NEPISQPARP ENLDVAGVLK GIYRFADAPE GKEHPASILV
SGVTMPDALR AQELLAQEWN VGANVYSVTS WSELARDGIR ADRAAVREPS ADGARAYLTE
VLADVPGPFV AVSDYMRGVQ EQIRAYVPGT YLTLGTDGFG FSDTRPAARR FFNVDAESIV
VGVLVALARD GHIPFTVARE AADKYQITDV SAAEVSYADT GSA
|
|---|
| |