Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_2445 |
Symbol | |
ID | 8551809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 2611617 |
End bp | 2615216 |
Gene Length | 3600 bp |
Protein Length | 1199 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | methionine synthase |
Protein accession | YP_003273579 |
Protein GI | 262202371 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.795669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTCTG TTTCCCGTCC CGACCACAGC ACCGATCCGG CCGACTTCGA CACGACGTTC ATGTCGGCGA TGTCGCGCCG GGTGCTGATC GGCGACGGGG CGATGGGCAC CATGTTGCAG GCGGCCGACC TCACGCTCGA CGACTTCAAC GGACTCGAGG GTTGTAATGA GATCCTCAAC GACGCCCGCC CCGATGTGCT CGAGGGCATT CATCGCGCCT ACTTCGAGGC CGGTGCCGAC GCGGTGGAGA CCAACACCTT CGGCTGCAAC CTGTCCAACC TGGGCGACTA CGACATCGCC GACCGGATCC GCGAACTCGC CTACAAGGGC ACCGGCATCG CACGCGGCGT CGCCGACGAG ATGGGTCCGA CGGCCAATGG CACCGATCGT TTTGTGCTCG GCTCGATCGG GCCCGGAACC AAATTGCCCA GCTTGGGGCA CACGACCTTC GCGGTCATCC GGGACGCCTA CTTCGAATGC GTCGCCGGGA TGCTCGACGG TGGTGCCGAC GCGATCCTGA TCGAGACCTC GCAGGATCTG CTGCAGGTCA AGGCGGCCGT GGTGGCCGCC CGGCGCGCCA TGGACAAACT CGGTCGTCGG ATCCCGATCA TCTCCCACGT CACCGTGGAG ACCACCGGCA CGATGCTGCT CGGCTCGGAG ATCGGTGCCG CCCTGACCGC GATCGAACCA CTCGGCGTCG ACATGATCGG GCTGAACTGC GCCACCGGGC CGGCCGAGAT GAGCGAGCAT CTCCGATACC TGTCCCGGCA TGCGCGGATC CCGGTGTCGG TGATGCCGAA TGCCGGGCTC CCCGTGCTCG GCCCCAACGG TGCCGAGTAT CCGCTGTCCC CGGAGGAACT CGCCCAGGCC CTGCACGGCT TCGTCGCCGA GTTCGGACTC GATTTCGTCG GCGGCTGCTG CGGCACCACA CCCGAACACA TCCGGCAGGT CGCCGAGGCG GTCCACGGGG CGACCCCGGC TGCCCGCACC CCCGAACACG CCTCGGAGAC GTCGTCGCTC TACACCGCGG TGCCCTTCGA TCAGGACGCC AGCTTCCTGG TGATCGGTGA ACGGACGAAC ACCAACGGCT CCAAGGCATT TCGCGAGGCA ATGATCGCCG GGGACTATCA GCGCTGCCTC GACATCGCCA AGGACCAGAC CCGCGACGGC GCCCACATGC TCGACCTCAA CGTCGACTAC GTGGGACGCG ACGGTGCCGT GGACATGACG GCCCTGGCGA GCCGGTTCGC GACGTCGTCG ACGTTGCCGA TCATGCTCGA CTCCACCGAG CCCGAGGTCA TCCGGGCGGG GCTGGAGACT CTCGGTGGAC GGTGTGCGGT CAACTCGGTG AACTACGAGG ACGGCGACGG CCCGAACTCC CGGTTCACCC GCATCATGCA GCTCGTCGTC GAGCACGGGG CCGCAGTGGT GGCGCTGACC ATCGACGAGG AGGGGCAGGC CCGCACCGCG GACTGGAAGG TGCGCATCGC CGAGCGACTG ATCGCCGACA TCACCGGCAA CTGGGGTCTC GCCGAGGAGG ACATCATCAT CGATGCCCTC ACCTTCCCGA TCTCCACCGG TCAGGAGGAG GTGCGCCGCG ACGGCATCGA GACCATCGAG GCGATCCGGC GCATCCACGA GGCGCATCCC GAGGTGCACT TCACGCTGGG CATCTCCAAC ATCTCCTTCG GTCTCAACCC GGCCGCACGC CAGGTCCTGA ACTCGGTGTT CCTGCACGAG TGCGTGCAGG CCGGGCTCGA CACCGCGATC GTGCACGCCT CCAAGATCCT GCCGATGGCC CGGATCCCGG AGGAGCATCG CAAGGTTGCC CTCGATCTGG TCTATGACCG TCGGGCGCCG GGGTACGACC CGCTGCAGAA GCTGATGGAA CTGTTCGAGG GTGTCTCCGC GGCGTCGGCG CGCGAGTCGC GGGCCGCCGA ACTGGCGAAA CTGCCGCTGT TCGAGCGCCT CGAACGGCGC ATCGTCGACG GCGAGCGCAA CGGCCTCGAA GACGATCTCG ACGAGGCGAT GACCACCGTC CCGCCGCTGA AGATCATCAA CGAGACCCTG CTGAGCGGCA TGAAGACCGT CGGCGAGCTG TTCGGGTCCG GACAGATGCA GCTGCCCTTC GTGCTGCAGT CCGCCGAGGT GATGAAAACC GCTGTGGCAC ACCTTGAACC GCATATGGAG TCCACCGGCG AAGACGGCAA GGGCAGGATC GTGCTGGCCA CGGTCAAGGG CGACGTGCAC GACATCGGCA AGAATCTGGT CGACATCATC CTGTCCAACA ACGGCTACGA GGTGGTCAAC ATCGGCATCA AGCAGCCGAT CACGAACATT CTCGACGTCG CCGCCGACAA GAAGGTCGAC GTCATCGGGA TGTCGGGGCT GCTGGTCAAG TCGACGGTCG TGATGAAGGA GAACCTCGAG GAGATCAACG CCCGCGGACT CGCCGACGAG TACCCGGTGC TCCTCGGTGG TGCCGCCCTC ACCCGGTCCT ATGTGGAGAA CGACCTGTCG GAGACCTACG AGGGCGACGT GCACTATGCG CGCGACGCCT TCGAGGGATT GCGTCTGATG GACGAGATCA TGGCGACCAA GCGAGGGGAG GGGCCGGACC CGGACAGTCC GGAGGCCATC GCCGCGGCCG AAAAGGCCGC CGAACGCAAG GCCCGCCACG ACCGGTCCAA GCGAATCGCC GCCAAACGCA AGGCCGCCGA GGAACCCGTA GAGGTGCCCG CGCGCTCGGA TGTGGCCGCC GACAACGACA TTCCCGCTCC ACCCTTCTGG GGAACCCGCA TCGTCAAGGG CGTTCCGGTC GCCGACTACC TCCAGCTCCT CGACGAGCGT GCCCTGTTCC TGGGGCAGTG GGGATTGCGC GGCGCCCGGG GCGGGGACGG ACCGTCGTAT GAGGATCTCG TCGAATCCGA GGGCCGCCCG CGGCTGCGGT ACTGGATCGA TCGGCTCGCC ACCGAGGGCA TCCTGCAGCA TGCCGCCGTC GTGTACGGCT ATTTCCCCGC GGTCAGCGAC GGCGACACCG TGCACGTGCT CACCGAGCCG CGCCCAGATG CCCCGGTGCG CTACAGCTTC GGCTTCCCGC GTCAGCAGCG ATCACGCTTC CTGTGCATCG CCGACTTCAT CCGGTCGCGT GAGGATGCCA TTCGCGACGG CCACGTGGAC GTGTTGCCGT TCCAGCTGGT CACCATGGGT CAGCCGATCG CGGACTTCGC CAACGAGTTG TTCGCCGCCG ACGCCTACCG TGACTACCTG GAGGTGCACG GTATCGGCGT GCAGCTGACC GAGGCGCTGG CCGAGTACTG GCATCAGCGC GTCCGTAGCG AACTCCGCTT CGGCGAACGC ACCATGGACA GCGAGGACCC CGACGAGGCA CAGGGCTTCT TCGACCTCGA ATACCGCGGT GCCCGTTTCT CTTTCGGGTA CGGCGCATGC CCCGACCTCG ACGACCGGGC CAAGATGATG GAATTGCTTC AACCCGAACG GATCGGCGTG CACCTATCCG AGGAACTGCA GCTACATCCC GAGCAGTCCA CCGACGCATT CGTGCTGCAT CACCCGGAGG CGAAGTACTT CAACACCTGA
|
Protein sequence | MSSVSRPDHS TDPADFDTTF MSAMSRRVLI GDGAMGTMLQ AADLTLDDFN GLEGCNEILN DARPDVLEGI HRAYFEAGAD AVETNTFGCN LSNLGDYDIA DRIRELAYKG TGIARGVADE MGPTANGTDR FVLGSIGPGT KLPSLGHTTF AVIRDAYFEC VAGMLDGGAD AILIETSQDL LQVKAAVVAA RRAMDKLGRR IPIISHVTVE TTGTMLLGSE IGAALTAIEP LGVDMIGLNC ATGPAEMSEH LRYLSRHARI PVSVMPNAGL PVLGPNGAEY PLSPEELAQA LHGFVAEFGL DFVGGCCGTT PEHIRQVAEA VHGATPAART PEHASETSSL YTAVPFDQDA SFLVIGERTN TNGSKAFREA MIAGDYQRCL DIAKDQTRDG AHMLDLNVDY VGRDGAVDMT ALASRFATSS TLPIMLDSTE PEVIRAGLET LGGRCAVNSV NYEDGDGPNS RFTRIMQLVV EHGAAVVALT IDEEGQARTA DWKVRIAERL IADITGNWGL AEEDIIIDAL TFPISTGQEE VRRDGIETIE AIRRIHEAHP EVHFTLGISN ISFGLNPAAR QVLNSVFLHE CVQAGLDTAI VHASKILPMA RIPEEHRKVA LDLVYDRRAP GYDPLQKLME LFEGVSAASA RESRAAELAK LPLFERLERR IVDGERNGLE DDLDEAMTTV PPLKIINETL LSGMKTVGEL FGSGQMQLPF VLQSAEVMKT AVAHLEPHME STGEDGKGRI VLATVKGDVH DIGKNLVDII LSNNGYEVVN IGIKQPITNI LDVAADKKVD VIGMSGLLVK STVVMKENLE EINARGLADE YPVLLGGAAL TRSYVENDLS ETYEGDVHYA RDAFEGLRLM DEIMATKRGE GPDPDSPEAI AAAEKAAERK ARHDRSKRIA AKRKAAEEPV EVPARSDVAA DNDIPAPPFW GTRIVKGVPV ADYLQLLDER ALFLGQWGLR GARGGDGPSY EDLVESEGRP RLRYWIDRLA TEGILQHAAV VYGYFPAVSD GDTVHVLTEP RPDAPVRYSF GFPRQQRSRF LCIADFIRSR EDAIRDGHVD VLPFQLVTMG QPIADFANEL FAADAYRDYL EVHGIGVQLT EALAEYWHQR VRSELRFGER TMDSEDPDEA QGFFDLEYRG ARFSFGYGAC PDLDDRAKMM ELLQPERIGV HLSEELQLHP EQSTDAFVLH HPEAKYFNT
|
| |