| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_2398 |
|---|
| Symbol | |
|---|
| ID | 8551761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | - |
|---|
| Start bp | 2556110 |
|---|
| End bp | 2557726 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Cholesterol oxidase |
|---|
| Protein accession | YP_003273533 |
|---|
| Protein GI | 262202325 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0159697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGAG ACATTTCCAC CCAAGGCGTC TCTCGCCGTT CCGTTCTGGT CGGCGCCGCC
GGCCTCGGTG CCCTCGGCGC GCTGGACGCC GCCGTCGCAC CCCGGGCGCA CGCCACGCCG
GCACCGGGTC CCAGCGCGAT CGTCATCGGC AGCGGGTTCG GCGGTGCGGT CGCGGCGCTG
CGTCTCGGCC GGGCCGGGAT CTCCACCACC GTTCTCGAAC GCGGTCGGCG CTGGCCGATC
CGCCCGGACG GCAACACCTT TGCCACGTTC ACCTCCCCGG ACCGGCGCGC GGCCTGGTTC
AGCGACACGG TCGGACTGAC CGGCACGATC GGCATCCCGG TCACGCGGTA CCCGGGCATC
CTCGACCGCA TCAAGGGAAA CGGCATCGAC GCGGTGTACG GCGCCGGAGT CGGTGGCGGT
TCGCTGGCCT TCGGCGCCTT CACACCCGTA CCCCGCCGCG TCGACTTCGA GCACGTCTTC
CCCGGGGGCG CCGACTACGA CGAACTGGTA CGCACGTACT ACCCGCGCGC AAAGAAGATG
CTCGGCGCGT CGCCCCTGCC GGCCGACATC ATGGCGCATC CGCGTTACGT GGGCACCCGC
TCCTGGCGGG CCACCGTCCG CCGTTACGGC AAAGAGCCTG TCAGCTTCGA CTACGCCATC
AACTGGGACG TGGTCCGCGA CGAGCTGGCC GGGCGCATCA AGCCCGCCAT CATCACCGGT
GAACTCGGCT TCGGCGTCAA CAGCGGTGCC AAGAACTCCG TGGACCACAA CTACCTGCCG
GCCGCCGAGG CCACCGGCCA CGTCACGATC AAACCCATGC ACGAGGTCTT CGAGATCCGT
CCGCGAGAAC GTCGCCGAGG ATTCGTCGTG TCCGCGCGCG TCATCGACGA GAACCACCGC
ACAGTCCAAG TGGTGACCCT CGAAGCCGAC TATCTGTTCC TCGCGGCCGG CTCCTTCCAC
ACCACCCGGA TGCTGGTGGA GGCGAGGGCA AAGGGCACCT TGCCCCGGCT CTCACCCCGC
ATCGGCGACG GCTTCGGCGC CAACGGTGAC TTCCTCACCG CCCGGACCGC ACTCTCCGAC
GACTACGGTG CCGTGCAGGG CGGGCCCGGG TTCGGCCGGG TCTACGAGGA CGATATGCCC
GGCGGACCGG TATCGATGGT CTATCACTCC ACACCGGTGC CCGCACCACT CGGAAAGACG
TTGACCACCA ACCTCATCCA GGCGCATACC GAGGAGCGAG GCACCATTGA CTACGATCAC
GCGACCCGTT CGGCAGTCAT CAACTACCCC CACCCGGAGG GCAACGATCT CGACCGCCGC
GGCGCGGCGT TCGCCGAGCG GTTCCGGCAG CGCGCGGAGA TCCGGCACGG ACGTACCACG
AGCGGCGTGC CCGTCTATTC GCGGGCGGCC GGCTTCGGGT CGGCGAGCAC GTATCACGGC
CTGGGTGGGG TGGTGATGAA CCGCGCGGCG ACGATGGACG GCGCGGTGCG CGGCTACGAG
AACCTGTACG TCGTCGACGG CTCGTTCGTG CCGGGCGCGG TGGGACTGGT GAACCCGGCG
CTGACCATCA CCGCACTCGC CGAACGGACG ATGGAACGGT TCCTGGCGCG GCGTTGA
|
|---|
| Protein sequence | MKRDISTQGV SRRSVLVGAA GLGALGALDA AVAPRAHATP APGPSAIVIG SGFGGAVAAL
RLGRAGISTT VLERGRRWPI RPDGNTFATF TSPDRRAAWF SDTVGLTGTI GIPVTRYPGI
LDRIKGNGID AVYGAGVGGG SLAFGAFTPV PRRVDFEHVF PGGADYDELV RTYYPRAKKM
LGASPLPADI MAHPRYVGTR SWRATVRRYG KEPVSFDYAI NWDVVRDELA GRIKPAIITG
ELGFGVNSGA KNSVDHNYLP AAEATGHVTI KPMHEVFEIR PRERRRGFVV SARVIDENHR
TVQVVTLEAD YLFLAAGSFH TTRMLVEARA KGTLPRLSPR IGDGFGANGD FLTARTALSD
DYGAVQGGPG FGRVYEDDMP GGPVSMVYHS TPVPAPLGKT LTTNLIQAHT EERGTIDYDH
ATRSAVINYP HPEGNDLDRR GAAFAERFRQ RAEIRHGRTT SGVPVYSRAA GFGSASTYHG
LGGVVMNRAA TMDGAVRGYE NLYVVDGSFV PGAVGLVNPA LTITALAERT MERFLARR
|
|---|
| |