Gene Gbro_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbro_1896 
Symbol 
ID8551246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGordonia bronchialis DSM 43247 
KingdomBacteria 
Replicon accessionNC_013441 
Strand
Start bp1988533 
End bp1989789 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content66% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003273044 
Protein GI262201836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGA TCGAACACCT GGTCGAGCAG CTGGCCAACT ACACCTGGGA CGACACCACC 
GGACCCGAGG CCCACACCAC ACTCACCTCG ATCCTGCGGC TACGCAATCT CGTCGAACAC
CACGCCGCAG TCCTGGTCGC CCGGCTGACC GCACTCGGCG TCGCCAAGAA ACAGGGCCGC
ACCATGCGGG AGTTGCTGAT CGTCATGGGC TGCGCCCCCG CCGTCGCATC ACGGTTGGTC
CGTGTCGCCG GGAACCTGGC GCCCCTGCCG CGCCTGGCCG GACATACCGC GGACGGAACA
GTGTCCGGCG AGCATGCCGA CGCGGTGGTG CGCGGGATGA CGCATATCGC CACCCGGAAT
GGGGAACCGC TCTCCGACTC CCAGCGTCAC AGTATGGTGA CCGATCTGCT CGCCCACACC
TTCTCCGGTG CCACGCCATC GGAGATCACC AACCGCGCCC GCGCATTAGG CAATCAACTC
GCCGACCAGT CCGACACCGG GTTGCCTGCG ACCGAAGACC GTGCCATCAA CGACTTCACC
GTCACCGTCA ACGAACCGAA AACCGGTGGG GATGGGCGCA CCATCGTGCG CGGAGACCTC
GACGCCGTCA TCGGAGAAAA ACTCCACACA TTGATCGACG CGTTCGCCGC GCCACGCCCC
GAACCCGACG GCGCCGAAGA CACCCGCGCA CCCGGACGCC GCCGCTCCGA TGCTTTGGAA
CGCGTCCTCG ACGCCGCCAT GACCGCCGCC GACCACGGCC TCCTACCCGG CGCACCCCGA
CAAACCGTGC TGCTCACCAT GCCCGCCGAC GCCGACGGCC GCGGCGTCCT CTCGTTCACC
GGGCCGGTCT CCGGGGCCAC CACCACCCTG CTCGCCTGTG ACTCCACCAT CACCGACATC
ATCATCAACG GCGACAACAT CCCCATCGCC ATTGGCCAAG ACGATCGCCT GTTCGGCCCG
AAACTCAGAA AGGCCCTGAT TGTGCGGGAT CAGTGCTGCA TCAAGTGCGG TGCCCCCGCC
GGCTGGACCC ACGCCCACCA CATCACCTTC TACTCCCACG GCGGTAAAAC CGTGTTGGAC
AACGGATGTC TGCTCTGTCC GTCGTGTCAC ACCGACGTGC ACCACGACGG CTGGGACATC
GTCATGGGAG ATGACCGACA CCCCTGGCTC ATCCCACCCG CCAGCGTCGA CCCGAGACGC
CGACCCCTAC CTGCCTACAA CCGGCGCACC ATGCGACTCG ACGACATTGC GGCGTGA
 
Protein sequence
MKQIEHLVEQ LANYTWDDTT GPEAHTTLTS ILRLRNLVEH HAAVLVARLT ALGVAKKQGR 
TMRELLIVMG CAPAVASRLV RVAGNLAPLP RLAGHTADGT VSGEHADAVV RGMTHIATRN
GEPLSDSQRH SMVTDLLAHT FSGATPSEIT NRARALGNQL ADQSDTGLPA TEDRAINDFT
VTVNEPKTGG DGRTIVRGDL DAVIGEKLHT LIDAFAAPRP EPDGAEDTRA PGRRRSDALE
RVLDAAMTAA DHGLLPGAPR QTVLLTMPAD ADGRGVLSFT GPVSGATTTL LACDSTITDI
IINGDNIPIA IGQDDRLFGP KLRKALIVRD QCCIKCGAPA GWTHAHHITF YSHGGKTVLD
NGCLLCPSCH TDVHHDGWDI VMGDDRHPWL IPPASVDPRR RPLPAYNRRT MRLDDIAA