Gene Gbro_1883 details

Gene Information

• Locus tag: Gbro_1883
• ID: 8551232
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Gordonia bronchialis DSM 43247
• Kingdom: Bacteria
• Replicon accession: NC_013441
• Strand: -
• Start bp: 1966862
• End bp: 1970788
• Gene Length: 3927 bp
• Protein Length: 1308 aa
• Translation table: 11
• GC content: 66%
• Product: 2-oxoglutarate dehydrogenase, E1 subunit
• Protein accession: YP_003273031
• Protein GI: 262201823

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.814952
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCAGGT CGATATCCGA TTTCGGACAG AACACATGGC TGGTCGAGGA AATGTACCAG 
CAGTTCAAGG AAGACCCGAA CTCGGTGGAC CCGAGTTGGC ATGACCTTCT GAAGAATTAC 
GAGCCCGGCG ACAACGGATC GGGCTCGGAC AGCGCGCCGG AAACGCAGTC GAACGGCAGC 
AATGGTTCGG CCCCGGAGAA GAAGCCTGCC GCACAGAAGT CGCCCACCGA GAAGTCGCCC 
ACCGAACAGT CGCCCGCGAA GAAGTCCACC CCGGCGCCGC AGAAGTCGGC AACCAAGGCG 
CAGGCGGGCG CCGAGACCGG CCCGGCCCGC ACCGGGCCGG GCGCGTCCGA ATCTACGCCG 
TCCAAACAGG TCACCCTCGA CCAGACGCCG GCCCGGCCCG CGGCCCGCAA GAGCACCGCG 
ACCAAGGAAT CGACTGCGAC CAAGGCGGCT TCGGGTCAGA GCGTCGCCAG CCGCGACGGA 
TCGTCGCGCT CGCAGAACCG CCCGGCGCCC AAGAAGCCGG CCGCCAAGGA TTCCGGGTCC 
AAGGATTCCG GGTCGTCGGA CGAGAGCCGT GTCCTGCGCG GTCCGGCCGC GGCGATCGCC 
AAGAACATGA ACCTCTCGCT GCAGATCCCG ACCGCCACGA GCGTGCGTGC GATCCCCGCG 
AAACTGATGA TCGACAACCG CATCGTCGTC AACAACCACC TCGCCCGCAC CCGCGGTGGC 
AAGATCAGCT TCACCCACAT CCTCGGCTAC GCCATCGTGC AGGCGATCAA GGCGTACCCG 
AACATGAACA ACCACTTCGC CGAGGTGGAC GGCAAACCCA ATGTGGTCAC GCCGGCGCAC 
ACCAACCTCG GTCTGGCGAT CGACCTCGTC GGCAAGGACG GCAACCGTAC GCTGGTGGTC 
GCCGCGATCA AGAACTGCGA GACAATGGGT TTCGCCGAGT TCTACTCCGC CTATCAGGAC 
ATCGTGCGAC GCGCCCGCGA CGGCAAGCTG ACCGCCGAGG ATTTCGCCGG CGTGACGATC 
TCGCTGACCA ACCCGGGCAC CATCGGCACC GTGCACTCGG TGCCGCGCCT GATGAAGGGG 
CAGGGCGCCA TCGTCGGCGC CGGCGCGATG GAGTACCCGG CCGAGTTCCA GGGAGCCAGC 
GACGAGCAGA TCGCCGAACT CGGCGTCGGC AAGCTGATGA CGTTGACCTC GACCTACGAT 
CACCGCATCA TCCAGGGCGC CGAATCCGGC GATTTCTTGC GGACCATCCA CGAACTGCTC 
CTCGACGATG CGTTCTACGA CGAGATCTTC ACCGCGTTCC ACATCCCCTA CGAGCCGGTC 
CGCTGGCGTC GCGACATCCC CGCCGGACTG GTCGACAAGA GCACCCGCGT CCTCGAACTG 
ATCGCCGCCT ACCGCAGCCG CGGCCACCTG ATGGCCGACA TCGATCCCCT GAAGATGGAC 
AGCGACGCGC GCGCCAGCCA CCCGGACCTT GATGTGCTGA CCTACGGCCT GACCCTGTGG 
GACCTCGACC GCACCTTCCG GGTCGGCGGA TTCCACGGCC AGGAGCGGAT GAAGCTACGC 
GACGTCCTGT CCATTCTTCG TGACGCCTAC TGCCGCCACG TGGGCGTGGA GTACACCCAC 
ATCCTCGAAC CCGACCAGCA GAAATGGCTG CAGGAGCGCG TCGAGATCAA GCACTCCAAG 
CCGCCGGTCG CCGAGCAGAA GTACATCCTG TCCAAGCTGA ACGCCGCCGA GGCCTTCGAG 
ACCTTCCTGC AGACCAAGTA CGTCGGGCAG AAGCGGTTCT CGCTGGAGGG TGCCGAGTCG 
GTCATCCCGA TGATGGACGC AGTCATCGAC CAGAGCGCCG AGCACAGCCT CAACGAGGTC 
GTCATCGGCA TGCCACACCG TGGCCGGCTG AACGTGCTCG CCAACATCGT CGGCAAGCCG 
TACTCGAAGA TCTTCTCCGA GTTCGAGGGC AATCTGAATC CGTCGCAGGC CCACGGGTCG 
GGCGACGTGA AGTACCACCT CGGCGCCGAG GGCAAGTACT ACCAGATGTT CGGCGACAAC 
GAGATCGCCG TGTCGCTCAC TGCCAACCCG AGTCACCTCG AAGCCGTCGA CCCGGTACTC 
GAGGGACTCG TCCGCGCCAA GCAGGACCAG CTCGACGAGG ACGGCGAGTT CTCGATCCTG 
CCGCTGATGC TGCACGGCGA CGCGGCCTTC GCCGGGCAGG GCGTGGTTCC CGAGACCCTG 
AACCTGGCGA TGCTCCCCGG CTACCGCACC GGCGGCACCG TTCACATCGT GGTCAACAAC 
CAGGTCGGAT TCACCACCGC GCCGGAACAT TCCCGCTCCT CGGAGTACTG CACCGACGTG 
GCCAAGATGA TCGGCGCGCC GATCTTCCAC GTCAACGGTG ACGACCCCGA GGCCTGCGTG 
TGGGTGGCCA AACTGGCCGT CGACTACCGG CAGACCTATC ACAAGGACGT CGTGATCGAC 
CTCGTCTGCT TCCGCCGTCG CGGACACAAC GAGGGCGACG ATCCGTCGAT GACCCAGCCG 
GCGATGTACG ACGTGATCGA CACCAAGCGT GGCGTCCGCA AGAGCTACAC CGAGGCCCTG 
ATCGGCCGCG GTGACATCTC CACCAAGGAG GCCGAGGACG CCCTGCGTGA CTACCAGGGA 
CAACTCGAAC GGGTCTTCAA CGAGGTCAAG GAACTCGAGA AGTACCGGCC GGAACCGAGC 
CCGTCGGTGG AGTCGGACCA GACGTTGCCG ACCAAGCTGG TCACCGCGGT GGACAAGACC 
ACGCTGCAGA CCATCGGCGA CGCGTTCGTG AACGTGCCCG ACGGCTTCGT GCCGCATCCG 
CGCGTCAAAC CGGTTCTCGA CCGCAGGCAC GAGGCATCGC GCAACGGCGG GATCGACTGG 
GCATTCGCCG AGTTGCTCGC CTTCGGGTCG CTGGTGCTCG AGGGACGCAC TGTGCGCCTG 
TCCGGTCAGG ACTCCCGCCG CGGGACGTTC TCACAGCGCC ATTCGGTGTT GATCGACCGC 
GAGAACGGCG CCGAATACAC CCCGCTGAAT CACCTCAAGC CGATCGACGG TGAACACGGC 
GGCGGCCGGT TCATGGTCTA CGACTCCCCG CTGAGCGAAT TCGCCGTCGT CGGTTTCGAA 
TACGGCTACT CTGTGGGCAA TCCCGACGCC CTGGTGCTCT GGGAAGGTCA GTTCGGCGAC 
TTCGTCAACG GCGCGCAGTC GATCATCGAC GAGTTCATCA GCTCGGGTGA GGCCAAGTGG 
GGTCAGCTCT CCGACGTGGT GCTGCTGCTG CCACACGGCC ACGAGGGTCA GGGCCCCGAC 
CACACGTCGG GTCGTATCGA GCGCTTCCTG CAGCTGTGCG CGGAGGGGTC GATGACCGTC 
GCCCTGCCGT CCACACCGGC GAGCTATTTC CACCTGCTGC GTCGTCACGT GCTCGACGGG 
ATCAGCCGGC CGCTGATCGT CTTCACGCCG AAGTCGATGC TGCGCAACAA GGCGGTGGTC 
TCCCCCGTCG AGGACTTCAC CGACGACAAG TTCCGCTCGG TGATCGACGA TCCGCACTTC 
GTGAACGGCG CCGATCGCGA CAAGGTGAAG CGCGTACTGC TGGTGAGCGG CAAGCTCTAC 
TACGAGCTCG CCGCCCGTCG CGACAAGGAG GAGCGTGAGG ACGTGGCGGT CGTGCGCGTC 
GAGCAGCTCT ATCCGGTGCC GCATCGTCGT CTTCGGAACA CGTTGGAGCA GTACGGCAAT 
GCCACCGACT TCGCCTGGGT CCAGGAGGAG CCGGCCAACC AGGGCCCGTG GCCGTTCCTC 
GGCCTGTGGC TGCCCGAGGT ACTGCCCGAT GCGCTCGGCG GCCTGCGACG GATCTCGCGC 
CGCGCGATGT CGGCGCCGTC GTCGGGTTCG AGCAAGGTGC ACGCCGTCGA GCAGCAGGAG 
ATCATCGACG AGGCCTTCGC CGAATAG 

 

Protein sequence

MSRSISDFGQ NTWLVEEMYQ QFKEDPNSVD PSWHDLLKNY EPGDNGSGSD SAPETQSNGS 
NGSAPEKKPA AQKSPTEKSP TEQSPAKKST PAPQKSATKA QAGAETGPAR TGPGASESTP 
SKQVTLDQTP ARPAARKSTA TKESTATKAA SGQSVASRDG SSRSQNRPAP KKPAAKDSGS 
KDSGSSDESR VLRGPAAAIA KNMNLSLQIP TATSVRAIPA KLMIDNRIVV NNHLARTRGG 
KISFTHILGY AIVQAIKAYP NMNNHFAEVD GKPNVVTPAH TNLGLAIDLV GKDGNRTLVV 
AAIKNCETMG FAEFYSAYQD IVRRARDGKL TAEDFAGVTI SLTNPGTIGT VHSVPRLMKG 
QGAIVGAGAM EYPAEFQGAS DEQIAELGVG KLMTLTSTYD HRIIQGAESG DFLRTIHELL 
LDDAFYDEIF TAFHIPYEPV RWRRDIPAGL VDKSTRVLEL IAAYRSRGHL MADIDPLKMD 
SDARASHPDL DVLTYGLTLW DLDRTFRVGG FHGQERMKLR DVLSILRDAY CRHVGVEYTH 
ILEPDQQKWL QERVEIKHSK PPVAEQKYIL SKLNAAEAFE TFLQTKYVGQ KRFSLEGAES 
VIPMMDAVID QSAEHSLNEV VIGMPHRGRL NVLANIVGKP YSKIFSEFEG NLNPSQAHGS 
GDVKYHLGAE GKYYQMFGDN EIAVSLTANP SHLEAVDPVL EGLVRAKQDQ LDEDGEFSIL 
PLMLHGDAAF AGQGVVPETL NLAMLPGYRT GGTVHIVVNN QVGFTTAPEH SRSSEYCTDV 
AKMIGAPIFH VNGDDPEACV WVAKLAVDYR QTYHKDVVID LVCFRRRGHN EGDDPSMTQP 
AMYDVIDTKR GVRKSYTEAL IGRGDISTKE AEDALRDYQG QLERVFNEVK ELEKYRPEPS 
PSVESDQTLP TKLVTAVDKT TLQTIGDAFV NVPDGFVPHP RVKPVLDRRH EASRNGGIDW 
AFAELLAFGS LVLEGRTVRL SGQDSRRGTF SQRHSVLIDR ENGAEYTPLN HLKPIDGEHG 
GGRFMVYDSP LSEFAVVGFE YGYSVGNPDA LVLWEGQFGD FVNGAQSIID EFISSGEAKW 
GQLSDVVLLL PHGHEGQGPD HTSGRIERFL QLCAEGSMTV ALPSTPASYF HLLRRHVLDG 
ISRPLIVFTP KSMLRNKAVV SPVEDFTDDK FRSVIDDPHF VNGADRDKVK RVLLVSGKLY 
YELAARRDKE EREDVAVVRV EQLYPVPHRR LRNTLEQYGN ATDFAWVQEE PANQGPWPFL 
GLWLPEVLPD ALGGLRRISR RAMSAPSSGS SKVHAVEQQE IIDEAFAE