| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_1560 |
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| Symbol | |
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| ID | 8550908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gordonia bronchialis DSM 43247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013441 |
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| Strand | + |
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| Start bp | 1623126 |
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| End bp | 1626713 |
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| Gene Length | 3588 bp |
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| Protein Length | 1195 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_003272728 |
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| Protein GI | 262201520 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.93701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGACTC CGCGTGCCCT CGTCGGGCTT TCCGAGCTGG CCTGTGCAGA CACCGCGATC
TCGGGAATCC GCGCCCGGCG TGACGAAGTG CACGTCGACC TCACCGCCCC CGACGCCGCC
CGCCCCTTTG TGGTGGCCTG CCTCGCCAAG GACGCCGATG CGCCCCTGCT CGTGGTCTCG
GCCAACGGAC GCGAGGCCGA CGATCTGACC GCCGAACTGG CCGAACTGCT CGACGAGCCC
GACGCGGTGG CCCAGTTCCC GTCATGGGAG ACGCTCCCGC ATGAGCGGCT CTCGCCCAGC
GCGGACACGG TCGGTGCGCG ATTGGCGGTG CTGCATCGGC TCGCCAACCC CGGGGATTCG
CCGTTGCGCG TGGTGGTCAC GACGGTGCGG TCGCTGGTGC AGCCGATGGC GCCCGGACTC
GGCGACGTCG CCACCATCAG CCTCGCCGAG GGCTTCGAGA TCGACTTCGA CGGCCTGCTC
ACCGATCTCG TCGAGATGGC CTACGAGCGG GTGGACATGG TCGGCCGCCG CGGTGAGTTC
GCGGTGCGCG GCGGAATCCT CGATGTCTTC CCGACGACCG CCGACTACCC GGTCCGTGTG
GAGTTCTGGG GCGACGAGAT CACCGAGATG CGGGCCTTCT CGGTCGCCGA TCAACGTAGC
CAGCCCGAGG TCGAGGCGAC CCGGGTGGAC ATCCATCCGT GCCGTGAACT GCTGCTTACC
GATGAGATCC GTACTCGCGC AGCTGAACTC GCGTCACAGT TCGAAGGTGA TCCGACGCTG
GCCGAGATGC TGACCAAGCT CGCCGAGGGT ATCCCGGTCA ACGGGATGGA GGCCCTGATC
CCCGCTCTGG TCGACGGGCG GATGCAGCTG CTCACCGAGG TGGTCCCGGC CGGCACACGG
GTGCTCATCC TGGATCCGGA GAAGGTCCGC ACCCGGGCGG CCGACCTGTC GAAGACGGGC
GCGGAGTTCC TGGAGGCGTC GTGGACGGCC GCCGCGATGG GTGCGCAGGG GCCGCTGGAC
GGACGGTCCT CGCAGGCGCT CGGCGTCGAC CTGCAGGCCA GTGCCTACCG TCCGCTCGAC
GAGGTGCGCG AGACGACGCT CGCCGCCGGA CGGTCCTGGT GGACGATCAG CCCGCTGGCC
ACCGGTGACG ATCACGAGGT GGTGCTCGAC CTCGCGCCGG GGCCGGCTCC GCGCGGCGAC
GACAACGAGA TCGTTGCGGT ATTCGCCCAG TTGCGTGCCC ATGTCCGAGC CGGGCAGACG
GCGGCAATCG TGGTGGCGGG CAAGGGAACC GCTCAGCGGG TGGGTGAGCG GCTGGCCGAT
GCCGAGGTTC CGCACGTCAT CGCCGAACCG GGCCATCGGC CCGCCCCGGG TGAGGTGAGC
GTCTTCGGCG GTACCCTGCG CCACGGGCTG GTGTGCCCGG ACGCCGGCCT GGTCATCGTC
ACCGAGGCCG ACCTGACCGG TACCCGCGTC GCGAATGTCC GTGACGGACG CAAACTTCCG
GCCAAGCGTC GCAATCAGGT CGACCCGCTG GCGCTCACCG CGGGCGACCT CGTGGTCCAC
GACCAGCACG GCATCGGCAA GTTCGTGGAG ATGATCGAGC GCACGGTGTC GGGTGCGCGA
CGCGAGTACC TGGTGCTCGA GTACGCGCCG TCCAAACGGG GGCAGCCCGG CGACCGCCTG
TACGTGCCGA TGGATGCCCT CGATCAGTTG TCGCGGTACG TCGGTGGTGA GCAGCCGTCG
CTGTCCAAGC TCGGCGGCTC GGACTGGCAG AACACCAAAC GCAAGGCGCG CAAGGCGGTC
CGCGAGATCG CCGGTGAGCT GGTGCAGCTG TATGCGGCCC GGCACGCGGC CCCGGGACAT
GCCTTCGGGC CGGACACTCC GTGGCAGCAG GAGATGGAGG ACGCCTTCGA CTTCACCGAG
ACCGTCGATC AGATGACGGT GATCGGCGAG GTGAAGGCCG ACATGGAGCG TCCGGTGCCG
ATGGATCGCG TCATCGTCGG CGACGTGGGC TACGGCAAGA CCGAGATCGC GGTGCGCGCG
GCCTTCAAGG CAGTACAGGA CGGCAAGCAG GTCGCTGTCC TCGTTCCGAC GACAATCCTT
GCGCAACAGC ATCTTCAGAC ATTCTCCGAG CGAATGTCGG GATTTCCGGT GCGGGTTCGC
GGACTGTCCC GCTTCACCGA CGCCCGTGAG TCCCGGGAGA TCATCGACGC GATGGCGACC
GGTGAGGTGG ACATCGTGAT CGGAACCCAC CGCCTCCTGC AGACCGGTGT CACCTGGAAA
GACCTCGGTC TGGTCATCGT CGACGAGGAA CAGCGGTTCG GCGTCGAGCA CAAGGAACAC
ATCAAATCCC TGCGGACCCA CGTCGATGTG CTGACCATGT CGGCCACGCC CATCCCGCGC
ACCCTGGAGA TGTCGATGGC CGGCATCCGC GAGATGTCGA CGATCCTCAC CCCGCCGGAG
GAGCGGCACC CGGTGCTGAC CTATGTGGGT GCCTACGCCC CCAAACAGGT TGCCGCCGCC
ATCCGGCGCG AGTTGCTGCG CGACGGTCAG GTGTTCTACG TGCACAACCG GGTCTCGACA
ATCGACAAGA CCGCCCGCGA CATCGCCGCG ATGGTTCCCG AGGCGAGAGT TGTTGTGGCG
CACGGCCAGA TGAACGAGGA TCAACTGGAG AAGACGGTCT CCGGGTTCTG GAACCGCGAG
TTCGACGTGC TGGTGTGTAC CACCATCATC GAGACCGGCC TGGACATCTC CAACGCCAAC
ACCCTGATCG TCGACCGTGC CGAGAACCTG GGGCTGTCGC AGCTGCATCA GCTGCGGGGC
CGGGTGGGCC GCAGCCGCGA ACGCGGCTAC GCCTATCTGC TCTACAGCCC GGAACGTCCG
CTGACCGAGA CCGCCTACGA CCGGCTGGCC ACCATCGCGC AGAACAACGA GCTCGGTGCC
GGAATGGCGG TGGCGCTCAA GGATCTCGAG TTGCGTGGTG CCGGAAACGT GCTCGGTGCC
GAACAGTCCG GGCACGTCGC CGGCGTCGGG TTCGATCTGT ACGTGCGGCT CGTCGGCGAG
GCGGTGGAGG CCTATCGGGC CGCTGCGGAC GGACAGCCGG TGACCTCGCG TGAGACCGAG
GAGGTGCGCA TCGACCTGCC GGTCGACGCC CACATCCCGG TCGAGTACGT CGATTCCGAT
CGTCTGCGCC TCGAGGCGTA CCGCAAACTG GCGTCGGCCA TCGACGACGC GGCCGTCGAC
GGCGTCATCG CCGAGCTGAC CGACCGTTAC GGCGAACCGC CTGTGGAGAC CACCCGGTTG
GCAGCGATCG CCCGGCTGCG GCTGCGCTGC CGCGAACGGG GGATCACCGA AATCGGTTTG
GCCGGAACAG GTCTGAAGAT CTCGCCGTTG CCGCTGCTGG ACAGCGAGCA GGTGCGCCTC
AAACGTCTGT ACTCGGCGGC CAACTACCGG GCCACCACCT CGGTGGTGAC GTTGCCGATC
CCGCGGACCG GGGGAGTCGG CTCGGCCCGG CTGCGCGACG ACGAACTGAT CGTCTACCTG
ACGACCTTCC TCACCCAGCT CAAACCACTT GCCGAGACGA GGTCGTAG
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| Protein sequence | MSTPRALVGL SELACADTAI SGIRARRDEV HVDLTAPDAA RPFVVACLAK DADAPLLVVS
ANGREADDLT AELAELLDEP DAVAQFPSWE TLPHERLSPS ADTVGARLAV LHRLANPGDS
PLRVVVTTVR SLVQPMAPGL GDVATISLAE GFEIDFDGLL TDLVEMAYER VDMVGRRGEF
AVRGGILDVF PTTADYPVRV EFWGDEITEM RAFSVADQRS QPEVEATRVD IHPCRELLLT
DEIRTRAAEL ASQFEGDPTL AEMLTKLAEG IPVNGMEALI PALVDGRMQL LTEVVPAGTR
VLILDPEKVR TRAADLSKTG AEFLEASWTA AAMGAQGPLD GRSSQALGVD LQASAYRPLD
EVRETTLAAG RSWWTISPLA TGDDHEVVLD LAPGPAPRGD DNEIVAVFAQ LRAHVRAGQT
AAIVVAGKGT AQRVGERLAD AEVPHVIAEP GHRPAPGEVS VFGGTLRHGL VCPDAGLVIV
TEADLTGTRV ANVRDGRKLP AKRRNQVDPL ALTAGDLVVH DQHGIGKFVE MIERTVSGAR
REYLVLEYAP SKRGQPGDRL YVPMDALDQL SRYVGGEQPS LSKLGGSDWQ NTKRKARKAV
REIAGELVQL YAARHAAPGH AFGPDTPWQQ EMEDAFDFTE TVDQMTVIGE VKADMERPVP
MDRVIVGDVG YGKTEIAVRA AFKAVQDGKQ VAVLVPTTIL AQQHLQTFSE RMSGFPVRVR
GLSRFTDARE SREIIDAMAT GEVDIVIGTH RLLQTGVTWK DLGLVIVDEE QRFGVEHKEH
IKSLRTHVDV LTMSATPIPR TLEMSMAGIR EMSTILTPPE ERHPVLTYVG AYAPKQVAAA
IRRELLRDGQ VFYVHNRVST IDKTARDIAA MVPEARVVVA HGQMNEDQLE KTVSGFWNRE
FDVLVCTTII ETGLDISNAN TLIVDRAENL GLSQLHQLRG RVGRSRERGY AYLLYSPERP
LTETAYDRLA TIAQNNELGA GMAVALKDLE LRGAGNVLGA EQSGHVAGVG FDLYVRLVGE
AVEAYRAAAD GQPVTSRETE EVRIDLPVDA HIPVEYVDSD RLRLEAYRKL ASAIDDAAVD
GVIAELTDRY GEPPVETTRL AAIARLRLRC RERGITEIGL AGTGLKISPL PLLDSEQVRL
KRLYSAANYR ATTSVVTLPI PRTGGVGSAR LRDDELIVYL TTFLTQLKPL AETRS
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