Gene Gbro_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbro_1485 
Symbol 
ID8550832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGordonia bronchialis DSM 43247 
KingdomBacteria 
Replicon accessionNC_013441 
Strand
Start bp1546916 
End bp1548658 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content65% 
IMG OID 
Productcholine/carnitine/betaine transporter 
Protein accessionYP_003272656 
Protein GI262201448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00724238 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTG AAAACTTCCT GGCAAAACCG TCGCGGCGAG CCCTCGACCC CGCGGTTTTC 
GGGATAACGG CAGTTCTCGT CATCAGCTTC GTGGTCTGGG GGCTCCTGGA CCAGGAAAGC
CTCAACTCCG TCAGCCAGAA CATCCTCGAC GCCATCACCG ATAACCTCGG GTGGTTGTTC
ATCCTGTCGT CCACCGGTTT CGTCATCTTC GCGATCTGGC TGGCGCTGTC CAAGTACGGA
CGCATCCCAC TGGGCCGCGA CGACGACCAG CCCGAGTACC GCACGGTCAG CTGGATCGCG
ATGATGTTCA GCGCCGGTAT GGGTATCGGC CTGATGTTCT TCGGCGCGTA TGAGCCGCTG
TACCACTACG TCAGTGCCCC ACCGGAATTC CCCGTTCACG ACGTCCGGGC GGCGATGGCC
ACCACGATGT TCCACTGGGG GTTCCATCCG TGGGCGATGT ATGCGGTGGT GGGTCTCGCG
ATCGCCTACA GCACCTACCG GCTGGGTCGG ACCCAGCTGC TCAGCGCCGT CTTCGAGCCG
CTACTCGGCC ATCGTGCGAA CGGTCCGGGC GGCAAGGTCA TCGACATTCT CGCCATCTTT
GCGACCCTGT TCGGCACCGT CGCGTCGCTC GGCCTGGGCG CGCTGCAGAT CGGGTCGGGT
CTGGACACCG TCGGCTGGGT TCATGAGCCG ACCACACCGC TGCTCGTTGC CGTCATCGCC
ATCCTGACCG CTGCCTTCGT GCTGTCGGCG GTGTCCGGGA TCGCCCGGGG CATCCAGTGG
CTGTCGAACA TCAACATGGT GCTCGCGATC ATCCTGGCGG TCTTCGTCTT CGTCGTCGGG
CCGACGATCT TCATCCTCAA CCTGCTGCCC ACCACACTGG GCGCCTACGC CACCGACATC
ACCACCTTCT CGGCCCGGTC GTCGGCCACC GTCGACGCCG CCGGGGAGAA GTGGCTCGCG
GACTGGACGA TCTTCTACTG GGCGTGGTGG GTGAGCTGGA CCCCCTTCGT CGGCATGTTC
CTGGCCAAGA TCAGCAAGGG CCGCACGATC CGCGAGTTCG TCGTCGGCGT GATGCTGGTG
CCGACGACGG TGTCGCTGGT GTGGTTCTGC GTCTTCGGCG GCACTGCCAT CCGGGAGCAG
ATGACCGGCG TGCTCGGGTT CACCTCGGAC TCCAGCAGCG ACACCGCACT CTTCGACGTC
CTGGGCAACC TGCCGTTGAC CGGTGTCGCG TCGGCTCTGG TGATGTTCCT GGTCGCCATC
TTCTTTGTAT CCGGGGCCGA TTCGGCGTCG CTGGTGATGG GCACGCTGTC CGAGCGCGGG
GCACACGAAC CCTCGAAACT CGTGACCATC TTCTGGGGCA CCCTGACCGG CGCGGTCGCG
GCGTTGCTGC TGGCCATCAG TGGCGACGAC GCCCTCGAGG GCATCAAGAA GATGGCCATC
ATCGCGGCGC TGCCGTTCGT CGTGGTCATG ATCGGCATGT GTCTGTCGCT CTACCTCGAT
CTGCGCCGCG ACCCGCTGAT CGTGTCGCAG CGCATCCTGC GCACCCAGGT GGACAAGCAC
ATCCGGGAAC AGGCCGAGGC CATCACCACC GGCGAGTTCG AGGCGATCGA CCCGGAGACC
GCCGTCCTCA TCGAAGGGCT GCAGACCGAG AACGGTTCGT CGAACGGCTC GTCGAAATCC
GCCTCCGCCA CAACCGATGC GACCCACACG GAATCGGCGA CCGACCAGGC AGCGACGGAC
TGA
 
Protein sequence
MATENFLAKP SRRALDPAVF GITAVLVISF VVWGLLDQES LNSVSQNILD AITDNLGWLF 
ILSSTGFVIF AIWLALSKYG RIPLGRDDDQ PEYRTVSWIA MMFSAGMGIG LMFFGAYEPL
YHYVSAPPEF PVHDVRAAMA TTMFHWGFHP WAMYAVVGLA IAYSTYRLGR TQLLSAVFEP
LLGHRANGPG GKVIDILAIF ATLFGTVASL GLGALQIGSG LDTVGWVHEP TTPLLVAVIA
ILTAAFVLSA VSGIARGIQW LSNINMVLAI ILAVFVFVVG PTIFILNLLP TTLGAYATDI
TTFSARSSAT VDAAGEKWLA DWTIFYWAWW VSWTPFVGMF LAKISKGRTI REFVVGVMLV
PTTVSLVWFC VFGGTAIREQ MTGVLGFTSD SSSDTALFDV LGNLPLTGVA SALVMFLVAI
FFVSGADSAS LVMGTLSERG AHEPSKLVTI FWGTLTGAVA ALLLAISGDD ALEGIKKMAI
IAALPFVVVM IGMCLSLYLD LRRDPLIVSQ RILRTQVDKH IREQAEAITT GEFEAIDPET
AVLIEGLQTE NGSSNGSSKS ASATTDATHT ESATDQAATD