| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0149 |
|---|
| Symbol | |
|---|
| ID | 8549476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 163749 |
|---|
| End bp | 165479 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | RecB family nuclease, putative |
|---|
| Protein accession | YP_003271390 |
|---|
| Protein GI | 262200182 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.264456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGTTGG CGCCGCGTGA TCTCGCCGGA TGCGAGCACC GGCTGGCGCT TGACTTCGCA
CATCCGGAGC TGGTCCGTGA CCGGCCCGAC ACGCCCGGCG TGTCCCGCCG TAAGGAGGCC
GCCGCGGCAC ACCGCGCCCG GGTGCGCGAG TTGCTGCGGG GTATCCACAG CGACCAGCCC
GAGAGCTTCG TCGTCGTCGA TGCCGCGGAC AGTGCGACGC GTGCCCGCCA GACGATGCAG
GCCTGCGCGG ATGGTGCGCG CTGGATCTGG AATGCGACCC TGCCCCTCGA CGCCGAACAC
GGGCGGCGTG GCCACGCCGA ACTCCTCATC GCCCACGGCG ACGGCTACGT CCCGGTCATC
GTCGTCAACC ACCGAACCAC CCAACCGGCC AAAAAGCTGC CACGCGAAGC GGATGCGCGC
CCGACGACGG TGGTAACCAG TCCGCTCTGG GCGTGGGCTC CCGGTCCCGA TCCGCACCGC
ACCATCCGGC CGAACAGGCG CGACTCGCTG CGGCTGGCGC ATCTGACCGC GATGCTCGTC
GAACTGGGCC TGGCGGTGGG CCCCGACGCC GACGACCTGG TGGGTGGCGT GATCGGGATG
GATGCCGACT GCATCGTCGT GTTGGCCGTC GGGCCGATCC TCGACGACTA CGCACAGGTC
GCAGAACGAC GCAAACAGAT TGCGGCGCAA CGGATAGCCA CCGTCCCGCG ACGGGTGTCC
GAATGCCGGT CGTGTCTGTG GTGGGCACGG TGCGGGCCGG AACTCGCCGA GCGGCGTGAC
GTGAGCCTGG TGGCGTCGGG CAACCAGGGC CAGGCGCTGG TGGCGGCGGG GATCACCACC
ATCGATCAGC TTGCCCGGCA CGACGGTCCG GTCCCCGATG GTTGGCCGGG CAGCGCGCGA
TTCGACGACG CGATCGTGAA TGCCGTTGCG TGGCTGGGGT ACATCCCGCT GGTACGTCGC
GTCGATCGCC CGGAGGTCAG CCGCGCCGAC GTTGAGATCG ACGTGGACAT GGAGAGTTTC
GGCGAGGACG GAGCTTACCT CTGGGGAACG TTGCTCACCG ACAACACCGA TCCCGACCGC
CCGGTGATAT ACCGTCCCTT CGTCACCTGG GACCCGCTGC CCACTCGCGA TGAGGCACGG
TCCTTCGCCG AGTTCTGGCA CTGGCTCACC GCCGAACGTG CCGCTGCCCA CGCGGCGGGG
AAAACCTTTG CGGCCTACTG CTATTCCGAA CAGGCCGAGA ACCGGTGGCT GCTCGGCTCG
GCGGACAGAT TCGCCGGTGA ACCAGGCATC CCGGACCGGG CCGCGGTGGA GGCGTTCATC
GCCTCACCGG AATGGGTGGA CATCTACGCC GCTGTTGGGC GGAACTTCAT CTGCCCCAAC
GGAAAAGGAC TCAAGAAGGT CGCCCCGGTT GCCGGCTTCA CCTGGCGCGA CGACGACGCC
GGCGGTGAGG CGTCGATGGA ATGGTACAGC GCGGCAGTCG GTCTCGGCGG TGCGGCGGTG
GACACATCGC AACGCACCCG GCTGCTCGAG TACAACGAGG ACGACGTCCG GGCCACCAAG
GTGTTGCGCG AGTGGATCAC CGAAGCGGCG GCCGACGAGG TCCCGCACGA GCGCGATCTG
CTGGCATCGG GCGGCCATCG CGGCGGGGAG CCGACTGACC GGTCAGGAGC GCATGTTGCG
CAAGGCGTCG AGGAAGGAGC CGCTGCCGAG CAGCGCGATC GCGCCCAGTA G
|
|---|
| Protein sequence | MVLAPRDLAG CEHRLALDFA HPELVRDRPD TPGVSRRKEA AAAHRARVRE LLRGIHSDQP
ESFVVVDAAD SATRARQTMQ ACADGARWIW NATLPLDAEH GRRGHAELLI AHGDGYVPVI
VVNHRTTQPA KKLPREADAR PTTVVTSPLW AWAPGPDPHR TIRPNRRDSL RLAHLTAMLV
ELGLAVGPDA DDLVGGVIGM DADCIVVLAV GPILDDYAQV AERRKQIAAQ RIATVPRRVS
ECRSCLWWAR CGPELAERRD VSLVASGNQG QALVAAGITT IDQLARHDGP VPDGWPGSAR
FDDAIVNAVA WLGYIPLVRR VDRPEVSRAD VEIDVDMESF GEDGAYLWGT LLTDNTDPDR
PVIYRPFVTW DPLPTRDEAR SFAEFWHWLT AERAAAHAAG KTFAAYCYSE QAENRWLLGS
ADRFAGEPGI PDRAAVEAFI ASPEWVDIYA AVGRNFICPN GKGLKKVAPV AGFTWRDDDA
GGEASMEWYS AAVGLGGAAV DTSQRTRLLE YNEDDVRATK VLREWITEAA ADEVPHERDL
LASGGHRGGE PTDRSGAHVA QGVEEGAAAE QRDRAQ
|
|---|
| |