Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gbro_0009 |
Symbol | |
ID | 8549335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gordonia bronchialis DSM 43247 |
Kingdom | Bacteria |
Replicon accession | NC_013441 |
Strand | + |
Start bp | 12781 |
End bp | 14352 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003271263 |
Protein GI | 262200055 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCAGC TGTTGGAGTT GTTTCGGCAT TGGTATGCCG GACGCTCGCA GGTGCAGATT TCCCAGGCGT TGGGCCTGGA TCGCAAGACC ATCCGCAAGT ATCTCGCGTC GGCGCTGGCG GCGGGAATGA GCCCGGGCAC CGGGGACAAG TTCGACGAGT CGGTGTGGCG GGAGTTGATC GGCGGCTGGT TCCCCGAAGT TGTCGATCCC TCGACGCGGG CGGTGACGTG GCCGCCGATC GCCAAGCATC ATAAGTGGAT CAGCGGCCAG CTCGATGCCA CGGTGACGGT GGCCACGATC GCGCAACGTC TGCGCGACGA CCACGGGGTT GATGTGTCGG AATCGTCGGT ACGCCGTTAT GTGACAGCAC ATTTCGCTGA CAAGATCAAC GAGAAACGCG CAACCCCACC ACGACCCCCG GTACCTGCAG GCGAGGAAGC CCAAGTCGAT TACGGCAAGC TCGGGATGTG GACCAACCCT GAGACCGGGA AGCGGGTGTC GGTGTGGGCG TTCGCGATCA TCCTGTCGTG CTCGCGGTGG TTGTTTGTGC AGCCGGTCCT CAAGATGGAC CAAACATCTT GGTGCGCTTC GCATGTGGAT GCGTTCGAGT TTTTCGGCGG CGTGCCCGAG CGAATCGTTT GTGACAACCT CAAGACCGGG GTCAGCAAGC CTGATCTCTA CGATCCGCAG ATCAACCGGG CCTACGCCGA ACTCGCCTCG TTCTACGAGG TGCTGATCGA TCCGGCGCGC GCGTTCACTC CGAAAGACAA ACCGCGCATC GAGCGCCCGA TGCCCTACAT TCGGGACTCG TTCTTCACGG GCCGCGAGTT CACCAGCCTG CCGCAGATGC AACAGGCCGC CCTCGACTGG TGTCTGAACG TGTACGGCCG CCACGCCCAC CGCGGGATCG ATGGGGTGCC GCCCGCCGAA CTGTTCGCGC AGATCGAACG GGATGTGTTG ACTCCGTTGC CGCCCAGACG ATTTGAACGT GTCACCTACC ACGTGGGCAA GGTCGCCCCC GACTGTCATG TCAAGGCGGG CACAGCGTTG TACTCGGTGC CGTGGCGGCT GATCGGCTCA CACGTGCGGG TCCGCACGTG CGGGGATATG GTCCAGGTCT TCGCCGACGA CCAGGTCGTG GCAACCCACG TACTGCACCT GAGCGGACGA GCAACCAACC TCGAGCACTA TCCGCCGCAC AAGGTCGCCT ACCACTCCCG CCCGGTGGCG TGGTGCCGCA AGCAGGCCGA AGAGATCGGC GAGCACGCGG TCGCAGTCGT CGCTGAACTC TCCGAGGTCA ATGCGATCCA CCGCCTGCGC GCGATCCAGT CCATCGTCGG CTTGCGCACC AAGTATCCCG ATGACCGCAT CAACGCCGCC TGCGCCCGCG CGATCGCCGT CGGCGATGTC GGGCCACGCA CCATCAAAGG CATCCTGATC GCCGGTACCG AATACGACGA CACCATCACC ACACCGCCGG TAGCGCCGAC ACCACCGGCA TTTCTGGCTC TCCTGACCGA TCCGTGGGTC ATGACCGGCC GGGGAGGACT GGTCGGTGGC CGCCGAGGTT GA
|
Protein sequence | MTQLLELFRH WYAGRSQVQI SQALGLDRKT IRKYLASALA AGMSPGTGDK FDESVWRELI GGWFPEVVDP STRAVTWPPI AKHHKWISGQ LDATVTVATI AQRLRDDHGV DVSESSVRRY VTAHFADKIN EKRATPPRPP VPAGEEAQVD YGKLGMWTNP ETGKRVSVWA FAIILSCSRW LFVQPVLKMD QTSWCASHVD AFEFFGGVPE RIVCDNLKTG VSKPDLYDPQ INRAYAELAS FYEVLIDPAR AFTPKDKPRI ERPMPYIRDS FFTGREFTSL PQMQQAALDW CLNVYGRHAH RGIDGVPPAE LFAQIERDVL TPLPPRRFER VTYHVGKVAP DCHVKAGTAL YSVPWRLIGS HVRVRTCGDM VQVFADDQVV ATHVLHLSGR ATNLEHYPPH KVAYHSRPVA WCRKQAEEIG EHAVAVVAEL SEVNAIHRLR AIQSIVGLRT KYPDDRINAA CARAIAVGDV GPRTIKGILI AGTEYDDTIT TPPVAPTPPA FLALLTDPWV MTGRGGLVGG RRG
|
| |