| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbro_0001 |
|---|
| Symbol | |
|---|
| ID | 8554247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gordonia bronchialis DSM 43247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013441 |
|---|
| Strand | + |
|---|
| Start bp | 333 |
|---|
| End bp | 1862 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | chromosomal replication initiator protein DnaA |
|---|
| Protein accession | YP_003271255 |
|---|
| Protein GI | 262200047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTTCAG ACCGCGACAC ATTCGGTGAG GTGTGGCAAC AGGTCGTCGC CGAACTCAAC
GACGACGAGG CCGCACGCGA CCACGAACCC CTGACCAGGC AACAAAAGGC CTGGCTGTCG
CTGGTCCGAC CCCTCACGCT GGCCGAGGGC TTTGCGCTGC TCACCGTGCC GACGCCGCTG
GTACAGGAAC AGATCGAGCG CAATCTGCGC GACACCATCC GCTCGGCGCT CAGTAAACAC
CTCGGTCAGC CGGTGGACCT CGGTGTGCGC ATCGCCACGC CGCCCGCGGA AGAACCGGTC
GCCGAGCCCA TCCCCGCAGT GCTTCCCGCC GACGACGGCC TGAGCGCGGC ACTGACTACC
GGCGTCCCCA CACCGGCACC CGGCGCGCCG TTCCGCGGAC CCGGCCCCGT CGATCCGGCG
TCGGAGCGCC CACGACCGGA CACCGGTGAC TGGACCGCCT ACTTCGCCGA GCGGCCCACC
ACCGCTCCCG CGGTGCCCAG CGCGAATCTC AATCCCAAGT ACACCTTCGA CACCTTCGTC
ATCGGTGCGT CGAACCGCTT CGCGCACGCG TCGGCAGTGG CGGTGTCCGA GGCGCCGGCG
CGGGCCTACA ACCCGTTGTT CATCTGGGGC GAGTCGGGGC TGGGCAAGAC CCACCTACTG
CACGCTGCCG GGCACTACGC GCAGCGCCTG TTCCCCGGGA TGCGCGTCAA GTACGTCTCC
ACCGAAGAGT TCACCAACGA CTTCATCAAC TCGCTGCGCG ACGACCGTCG TGTCGCCTTC
AAGCGCCGCT ACCGCGACGT CGACGTCCTG CTCGTCGACG ACATCCAGTT CCTGATGGGC
AAAGAGGGCA TCCAGGAAGA GTTCTTCCAC ACCTTCAACA CGCTGCACAA CGCCAGCAAA
CAGATCGTCA TCTCCTCCGA TCGCCCGCCC AAACAGCTTG CGACACTTGA AGATCGGCTG
CGGACCCGGT TCGAGTGGGG TCTGATCACC GACGTCCAGC CGCCCGATCT CGAGACGCGG
ATCGCGATCC TGCGCAAGAA GGCGCAGATG GACAACATCG CGGTTCCCGA CGACGTGCTC
GAGCTGATCG CGTCCAAGAT CGAACGCAAC ATCCGTGAGC TCGAAGGTGC GCTGATCCGG
GTGACCGCCT TCGCCTCGCT CAACAACGCC GAACTCGACA AGTCCCTCGC CGATGTGGTC
CTGCAGGCGC TGCTGCCCAA TTCCGGGACG CTGGAGATCA GCGCGGCGAG CATCCTGGCG
ATCACGGCCG AGTACTTCGA CATCTCGGTG GAGGAGTTGC GCGGGCCCGG CAAGACCCGG
TCGATCGCGC AGGCCCGGCA GATCTCGATG TACCTGTGCC GTGAGCTCAC CGATCTGTCG
CTGCCCAAGA TCGGCGAGAC CTTTGATCGT GACCACACCA CCGTCATGTA CGCCGAGCGC
AAGATCCGCA AGGAGATGGC CGAGCGGCGC AAGGTCTACG ACCACGTCCA GGAACTCACC
GCGCGCATCA AGCAACGCGC CGTCCGCTGA
|
|---|
| Protein sequence | MTSDRDTFGE VWQQVVAELN DDEAARDHEP LTRQQKAWLS LVRPLTLAEG FALLTVPTPL
VQEQIERNLR DTIRSALSKH LGQPVDLGVR IATPPAEEPV AEPIPAVLPA DDGLSAALTT
GVPTPAPGAP FRGPGPVDPA SERPRPDTGD WTAYFAERPT TAPAVPSANL NPKYTFDTFV
IGASNRFAHA SAVAVSEAPA RAYNPLFIWG ESGLGKTHLL HAAGHYAQRL FPGMRVKYVS
TEEFTNDFIN SLRDDRRVAF KRRYRDVDVL LVDDIQFLMG KEGIQEEFFH TFNTLHNASK
QIVISSDRPP KQLATLEDRL RTRFEWGLIT DVQPPDLETR IAILRKKAQM DNIAVPDDVL
ELIASKIERN IRELEGALIR VTAFASLNNA ELDKSLADVV LQALLPNSGT LEISAASILA
ITAEYFDISV EELRGPGKTR SIAQARQISM YLCRELTDLS LPKIGETFDR DHTTVMYAER
KIRKEMAERR KVYDHVQELT ARIKQRAVR
|
|---|
| |