| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_6864 |
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| Symbol | |
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| ID | 8549283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 9398777 |
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| End bp | 9400615 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646391524 |
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| Product | oligoendopeptidase, pepF/M3 family |
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| Protein accession | YP_003271221 |
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| Protein GI | 262200012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.176327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC CAAGCGATGC AGCCGAGGTC CCGCGGCCCA ACTGGGACAT GCGACCGTAC
TTCACCTCAC CCGCCGGCCC CGACTACGCG GCCTTCTGGG ACATGTTGCG CACCAGCGTG
GCCGAGCTCG GCCACGCCCT CGACGCCCTG CCCGCCCTGA GCGAGGACAG CGCGGCGCAG
GACGCCTGGT CGGCCACCCT GCTCGAGCTC GAGGGCGTGC ACGCGCGCAT GCGGCACCTC
GAGTCGTATC TCGACTGCAT GGCCTCGGCC GACGCCCACG ACGAAGTCAT CCGCGCCGAC
GTCGGTCAAT TCGCGTCGCT ACAGGCGTCC TTCGCCGCGC TCGGCGTCCG GCTGCGCGCC
GCGCTCGGCC ACGCCGATGA CGGCGCCGTG GCCGCGCTGC TCGAGCGCCC CGAGCTGAGC
GCGGCCGAGC ACTGGCTGCG GCGCACCCGC GACAGCGCGC GCGAGTCCAT GAGCCCGGCG
CTCGAAGAGC TGGCCACCGA GCTCGGCGTC GACGGCATCG CCGCCTGGGG GCGGCTCTAC
GATCAGCTCT CGGGCACGCT GAGCTTCTCC CTCGAGGTCC CCGGCCGCGC GGCCGAAGAG
CACCCGGTGT CGATGGCGCG CACGCTGCTC GAAGACCCCG ATCCCGCGGT CCGCCAGGCC
GCGCTCGTGG GCTCGAACGC GGCCTGGGCC CGGGTGTCCG AGCCGGTGGC CGCGTGCCTC
AACGCCATCG CCGGCACCCG GCTCACGCTC TACCGCCGCC GCGGCGTCGG CCATTACCTC
GACCCCGCGC TGTTCGACGC CGCGATCACG CGCCGCACCC TCGACGCCAT GATGTCGGCC
GTGCGCGGCC GGCGCGCGCG CATGCAGCGC TACCTGGGCA TCAAGGCGCG CCTGCTCGGC
CGCGAGCGGC TGGGCTTTCA GGACCTGCTC GCGCCCCTGC CCGAGGACGC CGCGCCGCGC
ATCTCCTGGG ACCAGGCGCG CGAGCGCGTG CTCGCCGCCT TCGGCACCCA CTACCCCGCC
CTGCGCGAGT TCGCGGCCGA CGCCTTCGCC AAGCGCTGGC TCGATCACGA ACCGCGACGC
GGCAAGCGGC CCGGCGGCTT CTGCTCCAGC TCGCCCGTGA TCGGCGAGTC GCGCGTCTTC
ATGACCTATC ACGGCTCCAT GGGCGACCTC GAGACCCTAG CCCACGAGCT CGGTCACGCC
TTCCATAGCT GGGTGATGCG CGATATGCGC CCGTGGGCCC GGGTCTACCC CATGACCCTG
GCCGAGACCG CGTCGACCTT TGCCGAGCAG CTCGTGAGCG AGGCCATGCT CCAGGGCGGC
GACGCCGATC CCGCGACCCA GCGCGCGGTG CTCGACAGCC GGCTGCAAAA GGCCGCGGTG
TTTCTGCTCA ACATCCCCAT GCGCTTCGAC TTCGAGTGCG CGTTCTACGA GGCGCGGCAA
CACGGCGAGG TCGGCGTCAC CCGGCTGTGC GAGCTGATGC GCGCGGCCCA GCGCGACAAC
TACGGCGACG CGCTCGACCC CGATGCCCTC GACCCGTGGT TCTGGGCGTC GAAGCTGCAC
TTCTACATCA CCGAGCTCAG CTTCTACAAT TTCCCGTATA CCTTCGGGTA CTTGTTCAGC
CTCGGCATCT TCGCCCGGAC GCTCGGACAA GGACCGGAGG CGCTCGCGCG CTACGAGACG
CTGCTGCGCC GCACCGGCAG CGCCAGCGCC GAGCAGGTAG CCCGCGAAGG CCTCGGCGTC
GATCTCGAGA GCCCCGACTT CTGGAACGCC TCGCTCGATG TCATCGAGGC CGACCTGGGC
CGCTTCGAGC AGCTCAGCGG CAAAGGCAGC GGCTCGTAA
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| Protein sequence | MNQPSDAAEV PRPNWDMRPY FTSPAGPDYA AFWDMLRTSV AELGHALDAL PALSEDSAAQ
DAWSATLLEL EGVHARMRHL ESYLDCMASA DAHDEVIRAD VGQFASLQAS FAALGVRLRA
ALGHADDGAV AALLERPELS AAEHWLRRTR DSARESMSPA LEELATELGV DGIAAWGRLY
DQLSGTLSFS LEVPGRAAEE HPVSMARTLL EDPDPAVRQA ALVGSNAAWA RVSEPVAACL
NAIAGTRLTL YRRRGVGHYL DPALFDAAIT RRTLDAMMSA VRGRRARMQR YLGIKARLLG
RERLGFQDLL APLPEDAAPR ISWDQARERV LAAFGTHYPA LREFAADAFA KRWLDHEPRR
GKRPGGFCSS SPVIGESRVF MTYHGSMGDL ETLAHELGHA FHSWVMRDMR PWARVYPMTL
AETASTFAEQ LVSEAMLQGG DADPATQRAV LDSRLQKAAV FLLNIPMRFD FECAFYEARQ
HGEVGVTRLC ELMRAAQRDN YGDALDPDAL DPWFWASKLH FYITELSFYN FPYTFGYLFS
LGIFARTLGQ GPEALARYET LLRRTGSASA EQVAREGLGV DLESPDFWNA SLDVIEADLG
RFEQLSGKGS GS
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