Gene Hoch_6859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_6859 
Symbol 
ID8549278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp9394162 
End bp9394632 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content64% 
IMG OID646391519 
Productprotein of unknown function DUF55 
Protein accessionYP_003271216 
Protein GI262200007 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0506026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA AGTACTGGTT GATGAAGACC GAGCCAGACG TCTTCTCCAT CGACGATCTG 
GCCCGCGACC AGACCACGCT GTGGGAAGGC GTGCGCAACT ACCAGGCGCG CAACTTCATG
CGCGACGACA TGCGCAAGGG CGACGGCGTG TTGCTCTACC ACTCCAACGC CAAGCCCTCG
GGCGTGGCCG GGATCGCGCG CATCACGCGC ACCAGCTATC CCGACCCCAC GGCCTTCGAT
CCCGATAGCG CGTACCACGA TCCCAAGAGC GATCCCGAAA ATCCGCGCTG GCTCGTGGTC
GATGTCGGTT TCGTCGAGCG CTTCGCGGCC GTGGTACCGC TGGCCACCCT GCGCGAGACC
CGTGGTCTCG AGGACATGAT GGTCATCAAA AAGGGCATGC GTCTGTCGGT GCAGCCGGTG
AGCGCGGCCG AGTGGAAGAT CGTTTTGCGC CTCGGCCGCA AGGCAGGCTG A
 
Protein sequence
MAKKYWLMKT EPDVFSIDDL ARDQTTLWEG VRNYQARNFM RDDMRKGDGV LLYHSNAKPS 
GVAGIARITR TSYPDPTAFD PDSAYHDPKS DPENPRWLVV DVGFVERFAA VVPLATLRET
RGLEDMMVIK KGMRLSVQPV SAAEWKIVLR LGRKAG